STRINGSTRING
SFR94921.1 SFR94921.1 SFR95272.1 SFR95272.1 SFR95933.1 SFR95933.1 SFR83281.1 SFR83281.1 SFR96100.1 SFR96100.1 spo0A spo0A SFR84953.1 SFR84953.1 SFR86996.1 SFR86996.1 SFR87156.1 SFR87156.1 SFR87685.1 SFR87685.1 SFR83748.1 SFR83748.1 SFR92642.1 SFR92642.1 SFR93397.1 SFR93397.1 SFR93853.1 SFR93853.1 SFR94006.1 SFR94006.1 SFR94086.1 SFR94086.1 SFS03814.1 SFS03814.1 SFS04136.1 SFS04136.1 SFS04514.1 SFS04514.1 SFS04637.1 SFS04637.1 SFS04888.1 SFS04888.1 SFS05400.1 SFS05400.1 SFS11232.1 SFS11232.1 SFS11376.1 SFS11376.1 SFS11470.1 SFS11470.1 SFS11868.1 SFS11868.1 SFS11919.1 SFS11919.1 SFS12121.1 SFS12121.1 SFS12150.1 SFS12150.1 SFS12184.1 SFS12184.1 SFS12246.1 SFS12246.1 SFS09788.1 SFS09788.1 SFS09835.1 SFS09835.1 SFS09986.1 SFS09986.1 SFS16075.1 SFS16075.1 SFS16166.1 SFS16166.1 SFS16270.1 SFS16270.1 SFS16776.1 SFS16776.1 SFS14788.1 SFS14788.1 SFS17124.1 SFS17124.1 SFS17171.1 SFS17171.1 SFS17181.1 SFS17181.1 SFS17256.1 SFS17256.1 SFS17281.1 SFS17281.1 SFS14550.1 SFS14550.1 SFS18722.1 SFS18722.1 SFS18802.1 SFS18802.1 SFS20190.1 SFS20190.1 SFS20613.1 SFS20613.1 SFS20615.1 SFS20615.1 SFS20620.1 SFS20620.1 SFS20644.1 SFS20644.1 SFS20709.1 SFS20709.1 SFS20753.1 SFS20753.1 SFS20001.1 SFS20001.1 SFS20145.1 SFS20145.1 SFS21005.1 SFS21005.1 SFS21714.1 SFS21714.1 SFS21736.1 SFS21736.1 SFS21747.1 SFS21747.1 SFS21797.1 SFS21797.1 SFS21839.1 SFS21839.1 SFS21844.1 SFS21844.1 SFS21953.1 SFS21953.1 SFS22303.1 SFS22303.1 SFS22321.1 SFS22321.1 SFS22332.1 SFS22332.1 SFS22402.1 SFS22402.1 vanR vanR SFS22119.1 SFS22119.1 SFS22726.1 SFS22726.1 SFS22549.1 SFS22549.1 SFS22740.1 SFS22740.1 SFS22743.1 SFS22743.1 SFS22744.1 SFS22744.1 SFS22745.1 SFS22745.1 SFS22586.1 SFS22586.1 SFS22860.1 SFS22860.1 SFS22867.1 SFS22867.1 SFS22792.1 SFS22792.1 SFS22801.1 SFS22801.1 SFS22822.1 SFS22822.1 SFS22823.1 SFS22823.1 SFS22830.1 SFS22830.1 SFS22859.1 SFS22859.1 SFS23005.1 SFS23005.1 SFS23163.1 SFS23163.1 SFS23375.1 SFS23375.1 SFS23578.1 SFS23578.1 SFS23542.1 SFS23542.1 SFS23562.1 SFS23562.1 SFS23569.1 SFS23569.1 SFS23573.1 SFS23573.1 SFS23658.1 SFS23658.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SFR94921.1Amino acid-binding domain sensor hybrid histidine kinase. (951 aa)
SFR95272.1Two-component system, OmpR family, KDP operon response regulator KdpE. (232 aa)
SFR95933.1Helix-turn-helix domain-containing protein. (318 aa)
SFR83281.1Two-component system, OmpR family, KDP operon response regulator KdpE. (229 aa)
SFR96100.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (235 aa)
spo0ATwo-component system, response regulator, stage 0 sporulation protein A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. (272 aa)
SFR84953.1Two-component system, response regulator YesN. (434 aa)
SFR86996.1Two component transcriptional regulator, AraC family. (501 aa)
SFR87156.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (236 aa)
SFR87685.1Two-component system, OmpR family, KDP operon response regulator KdpE. (229 aa)
SFR83748.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (231 aa)
SFR92642.1EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). (579 aa)
SFR93397.1Two-component system, response regulator YesN. (505 aa)
SFR93853.1Helix-turn-helix domain-containing protein. (300 aa)
SFR94006.1PAS domain S-box-containing protein. (1016 aa)
SFR94086.1Two-component system, response regulator YesN. (528 aa)
SFS03814.1Two component transcriptional regulator, AraC family. (273 aa)
SFS04136.1Helix-turn-helix domain-containing protein. (267 aa)
SFS04514.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (234 aa)
SFS04637.1Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains. (488 aa)
SFS04888.1Signal transduction histidine kinase. (801 aa)
SFS05400.1Helix-turn-helix domain-containing protein. (569 aa)
SFS11232.1Helix-turn-helix domain-containing protein. (412 aa)
SFS11376.1PAS domain S-box-containing protein. (960 aa)
SFS11470.1Response regulator NasT. (182 aa)
SFS11868.1His Kinase A (phospho-acceptor) domain-containing protein. (852 aa)
SFS11919.1Helix-turn-helix domain-containing protein. (254 aa)
SFS12121.1Two component transcriptional regulator, LytTR family. (233 aa)
SFS12150.1PAS domain S-box-containing protein. (798 aa)
SFS12184.1Two component transcriptional regulator, LuxR family. (210 aa)
SFS12246.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (229 aa)
SFS09788.1Two-component system, response regulator YesN. (265 aa)
SFS09835.1Two-component system, response regulator YesN. (258 aa)
SFS09986.1Two component transcriptional regulator, AraC family. (533 aa)
SFS16075.1Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP. (228 aa)
SFS16166.1Signal transduction histidine kinase. (672 aa)
SFS16270.1Two-component system, response regulator YesN. (505 aa)
SFS16776.1Transcriptional regulator. (229 aa)
SFS14788.1Two-component system, response regulator YcbB. (288 aa)
SFS17124.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (223 aa)
SFS17171.1His Kinase A (phospho-acceptor) domain-containing protein. (930 aa)
SFS17181.1PAS domain S-box-containing protein. (1299 aa)
SFS17256.1Response regulator receiver domain-containing protein. (119 aa)
SFS17281.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (232 aa)
SFS14550.1Two component transcriptional regulator, AraC family. (273 aa)
SFS18722.1Helix-turn-helix domain-containing protein. (269 aa)
SFS18802.1His Kinase A (phospho-acceptor) domain-containing protein. (701 aa)
SFS20190.1Two-component system, response regulator YesN. (545 aa)
SFS20613.1Diguanylate cyclase (GGDEF) domain-containing protein. (733 aa)
SFS20615.1PAS domain S-box-containing protein. (1201 aa)
SFS20620.1PAS domain S-box-containing protein. (1426 aa)
SFS20644.1Signal transduction histidine kinase. (860 aa)
SFS20709.1Putative two-component system response regulator. (978 aa)
SFS20753.1FtsX-like permease family protein. (193 aa)
SFS20001.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (228 aa)
SFS20145.1Two component transcriptional regulator, LytTR family. (242 aa)
SFS21005.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (226 aa)
SFS21714.1Two-component system, response regulator YesN. (518 aa)
SFS21736.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (224 aa)
SFS21747.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (230 aa)
SFS21797.1Helix-turn-helix domain-containing protein. (246 aa)
SFS21839.1Two-component system, response regulator YesN. (542 aa)
SFS21844.1Putative two-component system response regulator. (1261 aa)
SFS21953.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (223 aa)
SFS22303.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (227 aa)
SFS22321.1Two-component system, response regulator YesN. (523 aa)
SFS22332.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (221 aa)
SFS22402.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (242 aa)
vanRTwo-component system, OmpR family, response regulator VanR. (235 aa)
SFS22119.1Two component transcriptional regulator, LytTR family. (247 aa)
SFS22726.1Amino acid-binding domain sensor hybrid histidine kinase. (924 aa)
SFS22549.1Two-component system, response regulator YesN. (347 aa)
SFS22740.1Signal transduction histidine kinase. (548 aa)
SFS22743.1Signal transduction histidine kinase. (685 aa)
SFS22744.1PAS domain S-box-containing protein. (1445 aa)
SFS22745.1PAS domain S-box-containing protein. (1196 aa)
SFS22586.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (245 aa)
SFS22860.1Two component transcriptional regulator, LytTR family. (239 aa)
SFS22867.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (233 aa)
SFS22792.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (226 aa)
SFS22801.1Helix-turn-helix domain-containing protein. (507 aa)
SFS22822.1Signal transduction histidine kinase. (839 aa)
SFS22823.1Signal transduction histidine kinase. (835 aa)
SFS22830.1Response regulator receiver domain-containing protein. (121 aa)
SFS22859.1Two component transcriptional regulator, LytTR family. (244 aa)
SFS23005.1Two-component system, response regulator YesN. (294 aa)
SFS23163.1Two component transcriptional regulator, LytTR family. (242 aa)
SFS23375.1Two-component system, response regulator YesN. (244 aa)
SFS23578.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (236 aa)
SFS23542.1Two-component system, response regulator YesN. (470 aa)
SFS23562.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (219 aa)
SFS23569.1Two-component system, chemotaxis family, response regulator CheY. (121 aa)
SFS23573.1Diguanylate cyclase (GGDEF) domain-containing protein. (314 aa)
SFS23658.1Response regulator receiver domain-containing protein. (555 aa)
Your Current Organism:
Clostridium citroniae
NCBI taxonomy Id: 358743
Other names: CCUG 52203, Clostridium citroniae Warren et al. 2007, DSM 19261, [. citroniae, [Clostridium] citroniae, strain RMA 16102
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