STRINGSTRING
sucB sucB ABM45160.1 ABM45160.1 ABM44685.1 ABM44685.1 secA secA sodB sodB rpoZ rpoZ ndk ndk secG secG pdhB pdhB pdhC pdhC secE secE rpoB rpoB ribD ribD secY secY rpoA rpoA ndvA ndvA ABM45194.1 ABM45194.1 ABM44436.1 ABM44436.1 grp grp ABM44785.1 ABM44785.1 secDF secDF ABM44964.1 ABM44964.1 ABM44556.1 ABM44556.1 trxB trxB ABM44673.1 ABM44673.1 ABM45360.1 ABM45360.1 ABM44793.1 ABM44793.1 ABM44603.1 ABM44603.1 pstS pstS ABM45294.1 ABM45294.1 trx trx
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sucB2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (401 aa)
ABM45160.1Transporter, major facilitator family; Identified by match to protein family HMM PF07690. (539 aa)
ABM44685.1ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. (606 aa)
secAPreprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. (910 aa)
sodBSuperoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (198 aa)
rpoZDNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (132 aa)
ndkNucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. (140 aa)
secGPreprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. (149 aa)
pdhBPyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (454 aa)
pdhCPyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (441 aa)
secEPreprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. (67 aa)
rpoBDNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1383 aa)
ribDRiboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. (374 aa)
secYPreprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (448 aa)
rpoADNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (337 aa)
ndvABeta-(1--2)glucan export ATP-binding protein; Involved in beta-(1-->2)glucan export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation (By similarity). (595 aa)
ABM45194.1Transporter, major facilitator family; Identified by match to protein family HMM PF07690. (474 aa)
ABM44436.1Identified by match to protein family HMM PF00578; match to protein family HMM PF08534. (157 aa)
grpGlutamate uptake regulatory protein Grp; Identified by similarity to SP:P74996; match to protein family HMM PF01037. (159 aa)
ABM44785.1Drug resistance transporter, Bcr/CflA subfamily; Identified by match to protein family HMM PF07690; match to protein family HMM TIGR00710. (417 aa)
secDFProtein-export membrane protein SecD/SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. (834 aa)
ABM44964.1Transporter, major facilitator family; Identified by match to protein family HMM PF07690. (402 aa)
ABM44556.1Transporter, major facilitator family; Identified by match to protein family HMM PF07690. (406 aa)
trxBThioredoxin-disulfide reductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01292. (317 aa)
ABM44673.1Dipeptide ABC transporter, permease protein; Similarity to DdpC; identified by similarity to SP:P77463; match to protein family HMM PF00528. (309 aa)
ABM45360.1Dipeptide ABC transporter, permease protein; Similarity to DdpB; identified by similarity to SP:P77308; match to protein family HMM PF00528. (357 aa)
ABM44793.1Dipeptide ABC transporter, periplasmic dipeptide-binding protein; Identified by similarity to SP:P76128; match to protein family HMM PF00496. (534 aa)
ABM44603.1Drug resistance transporter, EmrB/QacA subfamily; Identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; Belongs to the major facilitator superfamily. (525 aa)
pstSPhosphate ABC transporter, periplasmic phosphate-binding protein. (348 aa)
ABM45294.1ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. (588 aa)
trxThioredoxin; Identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; Belongs to the thioredoxin family. (107 aa)
Your Current Organism:
Bartonella bacilliformis KC583
NCBI taxonomy Id: 360095
Other names: B. bacilliformis KC583, Bartonella bacilliformis str. KC583, Bartonella bacilliformis strain KC583
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