Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EAT98121.1 | EAT98127.1 | CCC13826_1730 | CCC13826_1728 | Hypothetical protein. | Putative membrane protein. | 0.544 |
| EAT98121.1 | nosC1 | CCC13826_1730 | CCC13826_1725 | Hypothetical protein. | Monoheme c-type cytochrome. | 0.544 |
| EAT98121.1 | nosC2 | CCC13826_1730 | CCC13826_1724 | Hypothetical protein. | Monoheme c-type cytochrome; Pfam match to PF00034.16 Cytochrom_C. | 0.544 |
| EAT98121.1 | nosD | CCC13826_1730 | CCC13826_1727 | Hypothetical protein. | Copper ABC transporter NosDFY, periplasmic copper-binding protein NosD; Pfam matches to PF05048.8 NosD, and to PF13229.1 Beta_helix, and to PF13229.1 Beta_helix. | 0.544 |
| EAT98121.1 | nosF | CCC13826_1730 | CCC13826_1722 | Hypothetical protein. | Copper ABC transporter NosDFY, putative ATP-binding protein NosF; Pfam matches to PF00005.22 ABC_tran, and to PF13304.1 AAA_21. | 0.543 |
| EAT98121.1 | nosG | CCC13826_1730 | CCC13826_1726 | Hypothetical protein. | Menaquinol dehydrogenase NosGH, periplasmic component NosG; Pfam matches to PF12838.2 Fer4_7, and to PF13237.1 Fer4_10, and to PF00037.22 Fer4, and to PF13237.1 Fer4_10, and to PF14697.1 Fer4_21, and to PF13187.1 Fer4_9, and to PF14697.1 Fer4_21, and to PF13183.1 Fer4_8, and to PF00037.22 Fer4. | 0.544 |
| EAT98121.1 | nosH | CCC13826_1730 | CCC13826_1723 | Hypothetical protein. | Menaquinol dehydrogenase NosGH, membrane component NosH; Pfam matches to PF12801.2 Fer4_5, and to PF12801.2 Fer4_5, and to PF13187.1 Fer4_9, and to PF13237.1 Fer4_10, and to PF13183.1 Fer4_8. | 0.544 |
| EAT98121.1 | nosY | CCC13826_1730 | CCC13826_1721 | Hypothetical protein. | Copper ABC transporter NosDFY, putative permease protein NosY; Pfam matches to PF12679.2 ABC2_membrane_2, and to PF12730.2 ABC2_membrane_4, and to PF12698.2 ABC2_membrane_3, and to PF01061.19 ABC2_membrane. | 0.543 |
| EAT98121.1 | nosZ | CCC13826_1730 | CCC13826_1729 | Hypothetical protein. | Nitrous oxide reductase; Pfam matches to PF00116.15 COX2, and to PF13473.1 Cupredoxin_1, and to PF13442.1 Cytochrome_CBB3, and to PF00034.16 Cytochrom_C. | 0.757 |
| EAT98127.1 | EAT98121.1 | CCC13826_1728 | CCC13826_1730 | Putative membrane protein. | Hypothetical protein. | 0.544 |
| EAT98127.1 | nosC1 | CCC13826_1728 | CCC13826_1725 | Putative membrane protein. | Monoheme c-type cytochrome. | 0.800 |
| EAT98127.1 | nosC2 | CCC13826_1728 | CCC13826_1724 | Putative membrane protein. | Monoheme c-type cytochrome; Pfam match to PF00034.16 Cytochrom_C. | 0.949 |
| EAT98127.1 | nosD | CCC13826_1728 | CCC13826_1727 | Putative membrane protein. | Copper ABC transporter NosDFY, periplasmic copper-binding protein NosD; Pfam matches to PF05048.8 NosD, and to PF13229.1 Beta_helix, and to PF13229.1 Beta_helix. | 0.982 |
| EAT98127.1 | nosF | CCC13826_1728 | CCC13826_1722 | Putative membrane protein. | Copper ABC transporter NosDFY, putative ATP-binding protein NosF; Pfam matches to PF00005.22 ABC_tran, and to PF13304.1 AAA_21. | 0.954 |
| EAT98127.1 | nosG | CCC13826_1728 | CCC13826_1726 | Putative membrane protein. | Menaquinol dehydrogenase NosGH, periplasmic component NosG; Pfam matches to PF12838.2 Fer4_7, and to PF13237.1 Fer4_10, and to PF00037.22 Fer4, and to PF13237.1 Fer4_10, and to PF14697.1 Fer4_21, and to PF13187.1 Fer4_9, and to PF14697.1 Fer4_21, and to PF13183.1 Fer4_8, and to PF00037.22 Fer4. | 0.915 |
| EAT98127.1 | nosH | CCC13826_1728 | CCC13826_1723 | Putative membrane protein. | Menaquinol dehydrogenase NosGH, membrane component NosH; Pfam matches to PF12801.2 Fer4_5, and to PF12801.2 Fer4_5, and to PF13187.1 Fer4_9, and to PF13237.1 Fer4_10, and to PF13183.1 Fer4_8. | 0.933 |
| EAT98127.1 | nosY | CCC13826_1728 | CCC13826_1721 | Putative membrane protein. | Copper ABC transporter NosDFY, putative permease protein NosY; Pfam matches to PF12679.2 ABC2_membrane_2, and to PF12730.2 ABC2_membrane_4, and to PF12698.2 ABC2_membrane_3, and to PF01061.19 ABC2_membrane. | 0.982 |
| EAT98127.1 | nosZ | CCC13826_1728 | CCC13826_1729 | Putative membrane protein. | Nitrous oxide reductase; Pfam matches to PF00116.15 COX2, and to PF13473.1 Cupredoxin_1, and to PF13442.1 Cytochrome_CBB3, and to PF00034.16 Cytochrom_C. | 0.925 |
| dcuB | norZ | CCC13826_1000 | CCC13826_1535 | Anaerobic C4-dicarboxylate transporter; Pfam matches to PF03605.9 DcuA_DcuB, and to PF03605.9 DcuA_DcuB. | Nitric oxide reductase, monomeric type; Pfam match to PF00115.15 COX1. | 0.700 |
| dcuB | nosZ | CCC13826_1000 | CCC13826_1729 | Anaerobic C4-dicarboxylate transporter; Pfam matches to PF03605.9 DcuA_DcuB, and to PF03605.9 DcuA_DcuB. | Nitrous oxide reductase; Pfam matches to PF00116.15 COX2, and to PF13473.1 Cupredoxin_1, and to PF13442.1 Cytochrome_CBB3, and to PF00034.16 Cytochrom_C. | 0.471 |
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