Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABS50907.1 | ABS51108.1 | CHAB381_0694 | CHAB381_0692 | TPR repeat-containing protein. | Protein TolB; Identified by match to protein family HMM PF07676. | 0.940 |
| ABS50907.1 | ABS51555.1 | CHAB381_0694 | CHAB381_0690 | TPR repeat-containing protein. | Identified by match to protein family HMM PF02472. | 0.709 |
| ABS50907.1 | ABS52046.1 | CHAB381_0694 | CHAB381_0682 | TPR repeat-containing protein. | ATP synthase subunit B; Identified by match to protein family HMM PF00430; Belongs to the ATPase B chain family. | 0.829 |
| ABS50907.1 | ABS52261.1 | CHAB381_0694 | CHAB381_0691 | TPR repeat-containing protein. | Putative periplasmic protein. | 0.611 |
| ABS50907.1 | ABS52503.1 | CHAB381_0694 | CHAB381_0689 | TPR repeat-containing protein. | Identified by match to protein family HMM PF01618. | 0.722 |
| ABS50907.1 | atpA | CHAB381_0694 | CHAB381_0685 | TPR repeat-containing protein. | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | 0.613 |
| ABS50907.1 | atpC | CHAB381_0694 | CHAB381_0688 | TPR repeat-containing protein. | ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.629 |
| ABS50907.1 | atpD | CHAB381_0694 | CHAB381_0687 | TPR repeat-containing protein. | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | 0.600 |
| ABS50907.1 | atpF | CHAB381_0694 | CHAB381_0683 | TPR repeat-containing protein. | ATP synthase subunit B; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.892 |
| ABS50907.1 | atpG | CHAB381_0694 | CHAB381_0686 | TPR repeat-containing protein. | ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.681 |
| ABS50907.1 | atpH | CHAB381_0694 | CHAB381_0684 | TPR repeat-containing protein. | ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. | 0.875 |
| ABS50907.1 | pal | CHAB381_0694 | CHAB381_0693 | TPR repeat-containing protein. | Omp18; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.848 |
| ABS51108.1 | ABS50907.1 | CHAB381_0692 | CHAB381_0694 | Protein TolB; Identified by match to protein family HMM PF07676. | TPR repeat-containing protein. | 0.940 |
| ABS51108.1 | ABS51555.1 | CHAB381_0692 | CHAB381_0690 | Protein TolB; Identified by match to protein family HMM PF07676. | Identified by match to protein family HMM PF02472. | 0.932 |
| ABS51108.1 | ABS52046.1 | CHAB381_0692 | CHAB381_0682 | Protein TolB; Identified by match to protein family HMM PF07676. | ATP synthase subunit B; Identified by match to protein family HMM PF00430; Belongs to the ATPase B chain family. | 0.790 |
| ABS51108.1 | ABS52261.1 | CHAB381_0692 | CHAB381_0691 | Protein TolB; Identified by match to protein family HMM PF07676. | Putative periplasmic protein. | 0.849 |
| ABS51108.1 | ABS52503.1 | CHAB381_0692 | CHAB381_0689 | Protein TolB; Identified by match to protein family HMM PF07676. | Identified by match to protein family HMM PF01618. | 0.941 |
| ABS51108.1 | atpA | CHAB381_0692 | CHAB381_0685 | Protein TolB; Identified by match to protein family HMM PF07676. | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | 0.739 |
| ABS51108.1 | atpC | CHAB381_0692 | CHAB381_0688 | Protein TolB; Identified by match to protein family HMM PF07676. | ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.796 |
| ABS51108.1 | atpD | CHAB381_0692 | CHAB381_0687 | Protein TolB; Identified by match to protein family HMM PF07676. | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | 0.761 |
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