(12 nodes) Biotin metabolism, and Long-chain fatty acid biosynthetic process network (Fusarium poae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FAS2	Fatty acid synthase beta subunit; Belongs to the fungal fatty acid synthetase subunit beta family. (2104 aa)
	FAS1	Fatty acid synthase alpha subunit; Belongs to the thiolase-like superfamily. Fungal fatty acid synthetase subunit alpha family. (1856 aa)
	FPOA_13272	Uncharacterized protein. (265 aa)
	FPOA_09388	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (317 aa)
	FPOA_09526	Uncharacterized protein. (2280 aa)
	FPOA_11651	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (279 aa)
	FPOA_08961	Uncharacterized protein. (259 aa)
	FPOA_09072	Uncharacterized protein. (247 aa)
	FPOA_05290	Uncharacterized protein. (261 aa)
	FPOA_05684	Uncharacterized protein. (282 aa)
	FPOA_05905	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (288 aa)
	FPOA_03271	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (278 aa)

Your Current Organism:

Fusarium poae

NCBI taxonomy Id: 36050
Other names: F. poae

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FAS1	FAS2	A0A125RK87	A0A125RK69	Fatty acid synthase alpha subunit; Belongs to the thiolase-like superfamily. Fungal fatty acid synthetase subunit alpha family.	Fatty acid synthase beta subunit; Belongs to the fungal fatty acid synthetase subunit beta family.	0.998
FAS1	FPOA_03271	A0A125RK87	A0A1B8B9D1	Fatty acid synthase alpha subunit; Belongs to the thiolase-like superfamily. Fungal fatty acid synthetase subunit alpha family.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.696
FAS1	FPOA_05290	A0A125RK87	A0A1B8AWL4	Fatty acid synthase alpha subunit; Belongs to the thiolase-like superfamily. Fungal fatty acid synthetase subunit alpha family.	Uncharacterized protein.	0.771
FAS1	FPOA_05684	A0A125RK87	A0A1B8AX86	Fatty acid synthase alpha subunit; Belongs to the thiolase-like superfamily. Fungal fatty acid synthetase subunit alpha family.	Uncharacterized protein.	0.832
FAS1	FPOA_05905	A0A125RK87	A0A1B8AXY5	Fatty acid synthase alpha subunit; Belongs to the thiolase-like superfamily. Fungal fatty acid synthetase subunit alpha family.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.827
FAS1	FPOA_08961	A0A125RK87	A0A1B8AQG9	Fatty acid synthase alpha subunit; Belongs to the thiolase-like superfamily. Fungal fatty acid synthetase subunit alpha family.	Uncharacterized protein.	0.572
FAS1	FPOA_09072	A0A125RK87	A0A1B8AQX8	Fatty acid synthase alpha subunit; Belongs to the thiolase-like superfamily. Fungal fatty acid synthetase subunit alpha family.	Uncharacterized protein.	0.838
FAS1	FPOA_09388	A0A125RK87	A0A1B8AB01	Fatty acid synthase alpha subunit; Belongs to the thiolase-like superfamily. Fungal fatty acid synthetase subunit alpha family.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.827
FAS1	FPOA_09526	A0A125RK87	A0A1B8ABF3	Fatty acid synthase alpha subunit; Belongs to the thiolase-like superfamily. Fungal fatty acid synthetase subunit alpha family.	Uncharacterized protein.	0.949
FAS1	FPOA_11651	A0A125RK87	A0A1B8AHU2	Fatty acid synthase alpha subunit; Belongs to the thiolase-like superfamily. Fungal fatty acid synthetase subunit alpha family.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.836
FAS1	FPOA_13272	A0A125RK87	A0A1B8A691	Fatty acid synthase alpha subunit; Belongs to the thiolase-like superfamily. Fungal fatty acid synthetase subunit alpha family.	Uncharacterized protein.	0.771
FAS2	FAS1	A0A125RK69	A0A125RK87	Fatty acid synthase beta subunit; Belongs to the fungal fatty acid synthetase subunit beta family.	Fatty acid synthase alpha subunit; Belongs to the thiolase-like superfamily. Fungal fatty acid synthetase subunit alpha family.	0.998
FAS2	FPOA_03271	A0A125RK69	A0A1B8B9D1	Fatty acid synthase beta subunit; Belongs to the fungal fatty acid synthetase subunit beta family.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.696
FAS2	FPOA_05290	A0A125RK69	A0A1B8AWL4	Fatty acid synthase beta subunit; Belongs to the fungal fatty acid synthetase subunit beta family.	Uncharacterized protein.	0.771
FAS2	FPOA_05684	A0A125RK69	A0A1B8AX86	Fatty acid synthase beta subunit; Belongs to the fungal fatty acid synthetase subunit beta family.	Uncharacterized protein.	0.832
FAS2	FPOA_05905	A0A125RK69	A0A1B8AXY5	Fatty acid synthase beta subunit; Belongs to the fungal fatty acid synthetase subunit beta family.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.827
FAS2	FPOA_08961	A0A125RK69	A0A1B8AQG9	Fatty acid synthase beta subunit; Belongs to the fungal fatty acid synthetase subunit beta family.	Uncharacterized protein.	0.572
FAS2	FPOA_09072	A0A125RK69	A0A1B8AQX8	Fatty acid synthase beta subunit; Belongs to the fungal fatty acid synthetase subunit beta family.	Uncharacterized protein.	0.838
FAS2	FPOA_09388	A0A125RK69	A0A1B8AB01	Fatty acid synthase beta subunit; Belongs to the fungal fatty acid synthetase subunit beta family.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.827
FAS2	FPOA_09526	A0A125RK69	A0A1B8ABF3	Fatty acid synthase beta subunit; Belongs to the fungal fatty acid synthetase subunit beta family.	Uncharacterized protein.	0.949