(12 nodes) Nuclear Pore Complex (NPC) Disassembly network (Trichuris trichiura)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A077YW33	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (886 aa)
	A0A077YZ56	Nsp1 C domain containing protein. (196 aa)
	A0A077Z1D4	Nucleoporin SEH1; Belongs to the WD repeat SEC13 family. (345 aa)
	A0A077Z3P3	Nucleoporin N and Nucleoporin C domain containing protein. (1252 aa)
	A0A077Z606	Nuclear pore complex protein Nup133. (1014 aa)
	A0A077Z7G3	Ran BP1 domain containing protein. (744 aa)
	A0A077Z7I7	Nup160 domain containing protein. (509 aa)
	A0A077Z7K6	WD40 domain containing protein; Belongs to the WD repeat SEC13 family. (263 aa)
	A0A077Z9P6	DUF3414 domain containing protein. (1549 aa)
	A0A077ZBC8	Nuclear pore protein. (714 aa)
	A0A077ZBV8	Nuclear pore complex protein Nup88. (653 aa)
	A0A077ZGG6	Nup54 and DDE 1 domain containing protein. (516 aa)

Your Current Organism:

Trichuris trichiura

NCBI taxonomy Id: 36087
Other names: T. trichiura, human whipworm

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A077YW33	A0A077YZ56	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Nsp1 C domain containing protein.	0.994
A0A077YW33	A0A077Z1D4	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Nucleoporin SEH1; Belongs to the WD repeat SEC13 family.	0.999
A0A077YW33	A0A077Z3P3	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Nucleoporin N and Nucleoporin C domain containing protein.	0.995
A0A077YW33	A0A077Z606	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Nuclear pore complex protein Nup133.	0.999
A0A077YW33	A0A077Z7G3	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Ran BP1 domain containing protein.	0.999
A0A077YW33	A0A077Z7I7	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Nup160 domain containing protein.	0.999
A0A077YW33	A0A077Z7K6	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	WD40 domain containing protein; Belongs to the WD repeat SEC13 family.	0.999
A0A077YW33	A0A077Z9P6	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	DUF3414 domain containing protein.	0.997
A0A077YW33	A0A077ZBC8	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Nuclear pore protein.	0.998
A0A077YW33	A0A077ZBV8	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Nuclear pore complex protein Nup88.	0.989
A0A077YW33	A0A077ZGG6	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Nup54 and DDE 1 domain containing protein.	0.993
A0A077YZ56	A0A077YW33	Nsp1 C domain containing protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.994
A0A077YZ56	A0A077Z1D4	Nsp1 C domain containing protein.	Nucleoporin SEH1; Belongs to the WD repeat SEC13 family.	0.988
A0A077YZ56	A0A077Z3P3	Nsp1 C domain containing protein.	Nucleoporin N and Nucleoporin C domain containing protein.	0.996
A0A077YZ56	A0A077Z606	Nsp1 C domain containing protein.	Nuclear pore complex protein Nup133.	0.994
A0A077YZ56	A0A077Z7G3	Nsp1 C domain containing protein.	Ran BP1 domain containing protein.	0.999
A0A077YZ56	A0A077Z7I7	Nsp1 C domain containing protein.	Nup160 domain containing protein.	0.978
A0A077YZ56	A0A077Z7K6	Nsp1 C domain containing protein.	WD40 domain containing protein; Belongs to the WD repeat SEC13 family.	0.992
A0A077YZ56	A0A077Z9P6	Nsp1 C domain containing protein.	DUF3414 domain containing protein.	0.998
A0A077YZ56	A0A077ZBC8	Nsp1 C domain containing protein.	Nuclear pore protein.	0.998