16 items (Plasmodium falciparum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PF3D7_1438500	Cleavage and polyadenylation specificity factor subunit 3, putative. (876 aa)
	PF3D7_1451900	Ribosome biogenesis protein TSR1, putative. (1029 aa)
	PF3D7_1465300	Ribonuclease Z, putative. (858 aa)
	PF3D7_1013100	U3 small nucleolar RNA-associated protein 13, putative. (1220 aa)
	PF3D7_1124800	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (246 aa)
	PF3D7_0723700	Metallo-hydrolase/oxidoreductase, putative. (1032 aa)
	PF3D7_0825500	Protein KRI1, putative. (630 aa)
	PF3D7_0106700	Small ribosomal subunit assembling AARP2 protein. (1434 aa)
	PF3D7_0418700	RNA-binding protein NOB1, putative; Belongs to the NOB1 family. (569 aa)
	PF3D7_0303100	CLP1 P-loop domain-containing protein, putative. (1441 aa)
	PF3D7_0627900	Ribonuclease P protein subunit p29, putative. (291 aa)
	PF3D7_0623900	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (288 aa)
	PF3D7_0621500	Ribonuclease P/MRP protein subunit RPP1, putative. (343 aa)
	PF3D7_0709600	Ribonucleases P/MRP protein subunit POP1, putative. (1156 aa)
	PF3D7_1337500	Uncharacterized protein. (3334 aa)
	PF3D7_1340600	RNA lariat debranching enzyme, putative. (575 aa)

Your Current Organism:

Plasmodium falciparum

NCBI taxonomy Id: 36329
Other names: P. falciparum 3D7, Plasmodium falciparum (isolate 3D7), Plasmodium falciparum 3D7

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PF3D7_0106700	PF3D7_0418700	Q8I275	Q8I1Q0	Small ribosomal subunit assembling AARP2 protein.	RNA-binding protein NOB1, putative; Belongs to the NOB1 family.	0.858
PF3D7_0106700	PF3D7_0825500	Q8I275	Q8IB88	Small ribosomal subunit assembling AARP2 protein.	Protein KRI1, putative.	0.861
PF3D7_0106700	PF3D7_1013100	Q8I275	Q8IJR4	Small ribosomal subunit assembling AARP2 protein.	U3 small nucleolar RNA-associated protein 13, putative.	0.999
PF3D7_0106700	PF3D7_1124800	Q8I275	Q8IIB5	Small ribosomal subunit assembling AARP2 protein.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.806
PF3D7_0106700	PF3D7_1337500	Q8I275	A0A5K1K8Y0	Small ribosomal subunit assembling AARP2 protein.	Uncharacterized protein.	0.605
PF3D7_0106700	PF3D7_1451900	Q8I275	Q8IKV7	Small ribosomal subunit assembling AARP2 protein.	Ribosome biogenesis protein TSR1, putative.	0.879
PF3D7_0418700	PF3D7_0106700	Q8I1Q0	Q8I275	RNA-binding protein NOB1, putative; Belongs to the NOB1 family.	Small ribosomal subunit assembling AARP2 protein.	0.858
PF3D7_0418700	PF3D7_0621500	Q8I1Q0	C6KT53	RNA-binding protein NOB1, putative; Belongs to the NOB1 family.	Ribonuclease P/MRP protein subunit RPP1, putative.	0.827
PF3D7_0418700	PF3D7_0825500	Q8I1Q0	Q8IB88	RNA-binding protein NOB1, putative; Belongs to the NOB1 family.	Protein KRI1, putative.	0.516
PF3D7_0418700	PF3D7_1013100	Q8I1Q0	Q8IJR4	RNA-binding protein NOB1, putative; Belongs to the NOB1 family.	U3 small nucleolar RNA-associated protein 13, putative.	0.634
PF3D7_0418700	PF3D7_1124800	Q8I1Q0	Q8IIB5	RNA-binding protein NOB1, putative; Belongs to the NOB1 family.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.759
PF3D7_0418700	PF3D7_1451900	Q8I1Q0	Q8IKV7	RNA-binding protein NOB1, putative; Belongs to the NOB1 family.	Ribosome biogenesis protein TSR1, putative.	0.999
PF3D7_0621500	PF3D7_0418700	C6KT53	Q8I1Q0	Ribonuclease P/MRP protein subunit RPP1, putative.	RNA-binding protein NOB1, putative; Belongs to the NOB1 family.	0.827
PF3D7_0621500	PF3D7_0627900	C6KT53	C6KTB5	Ribonuclease P/MRP protein subunit RPP1, putative.	Ribonuclease P protein subunit p29, putative.	0.998
PF3D7_0621500	PF3D7_0709600	C6KT53	C0H4M3	Ribonuclease P/MRP protein subunit RPP1, putative.	Ribonucleases P/MRP protein subunit POP1, putative.	0.997
PF3D7_0621500	PF3D7_0825500	C6KT53	Q8IB88	Ribonuclease P/MRP protein subunit RPP1, putative.	Protein KRI1, putative.	0.877
PF3D7_0623900	PF3D7_0723700	C6KT75	Q8IBL6	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.	Metallo-hydrolase/oxidoreductase, putative.	0.435
PF3D7_0623900	PF3D7_1465300	C6KT75	Q8IKI5	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.	Ribonuclease Z, putative.	0.435
PF3D7_0627900	PF3D7_0621500	C6KTB5	C6KT53	Ribonuclease P protein subunit p29, putative.	Ribonuclease P/MRP protein subunit RPP1, putative.	0.998
PF3D7_0627900	PF3D7_0709600	C6KTB5	C0H4M3	Ribonuclease P protein subunit p29, putative.	Ribonucleases P/MRP protein subunit POP1, putative.	0.999