20 items (Plasmodium falciparum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A143ZWB4	SNARE protein, putative. (172 aa)
	PF3D7_1250500	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (157 aa)
	PF3D7_0816700	Trafficking protein particle complex subunit 2-like protein, putative. (143 aa)
	PF3D7_1324700	SNARE protein, putative; Belongs to the synaptobrevin family. (221 aa)
	PF3D7_0310700	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (145 aa)
	PF3D7_0217300	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (141 aa)
	PF3D7_0320100	Protein transport protein SEC22; Belongs to the synaptobrevin family. (221 aa)
	PF3D7_0415400	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (208 aa)
	PF3D7_0910600	SNARE protein; Belongs to the synaptobrevin family. (199 aa)
	PF3D7_1218300	AP-2 complex subunit mu, putative; Belongs to the adaptor complexes medium subunit family. (621 aa)
	PF3D7_1366600	Signal recognition particle receptor subunit alpha, putative. (576 aa)
	PF3D7_1332300	Trafficking protein particle complex subunit 2, putative. (163 aa)
	PF3D7_1311400	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (437 aa)
	Q8IET3_PLAF7	SNARE protein, putative; Belongs to the synaptobrevin family. (208 aa)
	PF3D7_0423100	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (146 aa)
	PF3D7_1134800	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (487 aa)
	PF3D7_1119500	AP-4 complex subunit mu, putative; Belongs to the adaptor complexes medium subunit family. (436 aa)
	PF3D7_1118100	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (155 aa)
	PF3D7_1440700	AP-3 complex subunit mu, putative; Belongs to the adaptor complexes medium subunit family. (733 aa)
	PF3D7_1405200	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (192 aa)

Your Current Organism:

Plasmodium falciparum

NCBI taxonomy Id: 36329
Other names: P. falciparum 3D7, Plasmodium falciparum (isolate 3D7), Plasmodium falciparum 3D7

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A143ZWB4	Q8IET3_PLAF7	A0A143ZWB4	Q8IET3	SNARE protein, putative.	SNARE protein, putative; Belongs to the synaptobrevin family.	0.404
PF3D7_0217300	PF3D7_1118100	O96254	Q8III7	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.615
PF3D7_0217300	PF3D7_1119500	O96254	Q8IIH2	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	AP-4 complex subunit mu, putative; Belongs to the adaptor complexes medium subunit family.	0.670
PF3D7_0217300	PF3D7_1218300	O96254	Q8I5M5	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	AP-2 complex subunit mu, putative; Belongs to the adaptor complexes medium subunit family.	0.999
PF3D7_0217300	PF3D7_1311400	O96254	Q8IEK4	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	0.670
PF3D7_0310700	PF3D7_0320100	O77358	O97323	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	Protein transport protein SEC22; Belongs to the synaptobrevin family.	0.559
PF3D7_0310700	PF3D7_0816700	O77358	C0H4V0	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	Trafficking protein particle complex subunit 2-like protein, putative.	0.997
PF3D7_0310700	PF3D7_1324700	O77358	C0H5D3	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	SNARE protein, putative; Belongs to the synaptobrevin family.	0.530
PF3D7_0310700	PF3D7_1332300	O77358	Q8IE05	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	Trafficking protein particle complex subunit 2, putative.	0.998
PF3D7_0310700	PF3D7_1405200	O77358	Q8IM42	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.999
PF3D7_0320100	PF3D7_0310700	O97323	O77358	Protein transport protein SEC22; Belongs to the synaptobrevin family.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.559
PF3D7_0320100	PF3D7_0415400	O97323	Q8I1T3	Protein transport protein SEC22; Belongs to the synaptobrevin family.	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	0.715
PF3D7_0320100	PF3D7_0816700	O97323	C0H4V0	Protein transport protein SEC22; Belongs to the synaptobrevin family.	Trafficking protein particle complex subunit 2-like protein, putative.	0.516
PF3D7_0320100	PF3D7_0910600	O97323	Q8I346	Protein transport protein SEC22; Belongs to the synaptobrevin family.	SNARE protein; Belongs to the synaptobrevin family.	0.899
PF3D7_0320100	PF3D7_1134800	O97323	Q8II16	Protein transport protein SEC22; Belongs to the synaptobrevin family.	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	0.758
PF3D7_0320100	PF3D7_1324700	O97323	C0H5D3	Protein transport protein SEC22; Belongs to the synaptobrevin family.	SNARE protein, putative; Belongs to the synaptobrevin family.	0.951
PF3D7_0320100	PF3D7_1332300	O97323	Q8IE05	Protein transport protein SEC22; Belongs to the synaptobrevin family.	Trafficking protein particle complex subunit 2, putative.	0.645
PF3D7_0320100	PF3D7_1405200	O97323	Q8IM42	Protein transport protein SEC22; Belongs to the synaptobrevin family.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.686
PF3D7_0415400	PF3D7_0320100	Q8I1T3	O97323	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	Protein transport protein SEC22; Belongs to the synaptobrevin family.	0.715
PF3D7_0415400	PF3D7_1134800	Q8I1T3	Q8II16	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	0.992