5 items (Plasmodium falciparum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PF3D7_1206100	IMP-specific 5'-nucleotidase, putative. (444 aa)
	PF3D7_0629100	Nicotinate phosphoribosyltransferase, putative. (665 aa)
	PF3D7_0926700	Glutamine-dependent NAD(+) synthetase, putative. (839 aa)
	PF3D7_0913300	Uncharacterized protein. (646 aa)
	PF3D7_1453500	NAD(P) transhydrogenase, putative. (1176 aa)

Your Current Organism:

Plasmodium falciparum

NCBI taxonomy Id: 36329
Other names: P. falciparum 3D7, Plasmodium falciparum (isolate 3D7), Plasmodium falciparum 3D7

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PF3D7_0629100	PF3D7_0926700	C6KTC6	Q8I2P2	Nicotinate phosphoribosyltransferase, putative.	Glutamine-dependent NAD(+) synthetase, putative.	0.833
PF3D7_0629100	PF3D7_1206100	C6KTC6	A0A144A134	Nicotinate phosphoribosyltransferase, putative.	IMP-specific 5'-nucleotidase, putative.	0.909
PF3D7_0913300	PF3D7_0926700	Q8I319	Q8I2P2	Uncharacterized protein.	Glutamine-dependent NAD(+) synthetase, putative.	0.933
PF3D7_0913300	PF3D7_1453500	Q8I319	Q8IKU3	Uncharacterized protein.	NAD(P) transhydrogenase, putative.	0.922
PF3D7_0926700	PF3D7_0629100	Q8I2P2	C6KTC6	Glutamine-dependent NAD(+) synthetase, putative.	Nicotinate phosphoribosyltransferase, putative.	0.833
PF3D7_0926700	PF3D7_0913300	Q8I2P2	Q8I319	Glutamine-dependent NAD(+) synthetase, putative.	Uncharacterized protein.	0.933
PF3D7_0926700	PF3D7_1206100	Q8I2P2	A0A144A134	Glutamine-dependent NAD(+) synthetase, putative.	IMP-specific 5'-nucleotidase, putative.	0.569
PF3D7_0926700	PF3D7_1453500	Q8I2P2	Q8IKU3	Glutamine-dependent NAD(+) synthetase, putative.	NAD(P) transhydrogenase, putative.	0.928
PF3D7_1206100	PF3D7_0629100	A0A144A134	C6KTC6	IMP-specific 5'-nucleotidase, putative.	Nicotinate phosphoribosyltransferase, putative.	0.909
PF3D7_1206100	PF3D7_0926700	A0A144A134	Q8I2P2	IMP-specific 5'-nucleotidase, putative.	Glutamine-dependent NAD(+) synthetase, putative.	0.569
PF3D7_1453500	PF3D7_0913300	Q8IKU3	Q8I319	NAD(P) transhydrogenase, putative.	Uncharacterized protein.	0.922
PF3D7_1453500	PF3D7_0926700	Q8IKU3	Q8I2P2	NAD(P) transhydrogenase, putative.	Glutamine-dependent NAD(+) synthetase, putative.	0.928