STRINGSTRING
PF3D7_1129500 PF3D7_1129500 NTH1 NTH1 PF3D7_0625300 PF3D7_0625300 PF3D7_0630300 PF3D7_0630300 PF3D7_0308000 PF3D7_0308000 PCNA PCNA FEN1 FEN1 PF3D7_1226600 PF3D7_1226600 PF3D7_1017000 PF3D7_1017000 PF3D7_1234300 PF3D7_1234300 PF3D7_1332600 PF3D7_1332600 PF3D7_1304100 PF3D7_1304100 PF3D7_1467100 PF3D7_1467100 PF3D7_1415000 PF3D7_1415000 PF3D7_1411400 PF3D7_1411400
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PF3D7_1129500A/G-specific adenine glycosylase, putative. (611 aa)
NTH1Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines; Belongs to the Nth/MutY family. (437 aa)
PF3D7_0625300DNA polymerase 1, putative. (1444 aa)
PF3D7_0630300DNA polymerase epsilon catalytic subunit A, putative. (2907 aa)
PF3D7_0308000DNA polymerase delta small subunit, putative. (498 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand. (274 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (672 aa)
PF3D7_1226600Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (264 aa)
PF3D7_1017000DNA polymerase. (1094 aa)
PF3D7_1234300DNA polymerase epsilon subunit B, putative. (624 aa)
PF3D7_1332600DNA-(Apurinic or apyrimidinic site) lyase 1, putative. (597 aa)
PF3D7_1304100DNA ligase. (912 aa)
PF3D7_1467100DNA-3-methyladenine glycosylase, putative. (501 aa)
PF3D7_1415000Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (322 aa)
PF3D7_1411400Plastid replication-repair enzyme. (2016 aa)
Your Current Organism:
Plasmodium falciparum
NCBI taxonomy Id: 36329
Other names: P. falciparum 3D7, Plasmodium falciparum (isolate 3D7), Plasmodium falciparum 3D7
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