STRINGSTRING
LOC107896933 LOC107896933 LOC107899496 LOC107899496 LOC107905915 LOC107905915 LOC107920077 LOC107920077 LOC107941703 LOC107941703
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107896933Nudix hydrolase 23, chloroplastic-like isoform X1. (269 aa)
LOC107899496WD repeat-containing protein 3-like. (929 aa)
LOC107905915U3 small nucleolar RNA-associated protein 6 homolog. (654 aa)
LOC107920077Transducin beta-like protein 3. (883 aa)
LOC107941703U3 small nucleolar RNA-associated protein 18 homolog. (558 aa)
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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