11 items (Gossypium hirsutum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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Predicted Interactions

gene neighborhood

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Your Input:
	LOC107904473	Crooked neck-like protein 1. (705 aa)
	LOC107913998	pre-mRNA-splicing factor SYF1-like. (913 aa)
	LOC107922165	Zinc finger CCCH domain-containing protein 40-like. (503 aa)
	LOC107924019	pre-mRNA-splicing factor SYF1-like. (913 aa)
	LOC107924173	Crooked neck-like protein 1. (705 aa)
	LOC107928342	Intron-binding protein aquarius-like isoform X1. (1521 aa)
	LOC107947367	Uncharacterized protein LOC107947367. (561 aa)
	LOC107947183	pre-mRNA-splicing factor syf2-like. (307 aa)
	LOC107949108	pre-mRNA-splicing factor syf2-like. (308 aa)
	LOC107950582	pre-mRNA-splicing factor ISY1 homolog. (299 aa)
	LOC107962732	SNW/SKI-interacting protein. (531 aa)

Your Current Organism:

Gossypium hirsutum

NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC107904473	LOC107913998	A0A1U8JDM9	A0A1U8KC12	Crooked neck-like protein 1.	pre-mRNA-splicing factor SYF1-like.	0.998
LOC107904473	LOC107922165	A0A1U8JDM9	A0A1U8KYM4	Crooked neck-like protein 1.	Zinc finger CCCH domain-containing protein 40-like.	0.995
LOC107904473	LOC107924019	A0A1U8JDM9	A0A1U8L555	Crooked neck-like protein 1.	pre-mRNA-splicing factor SYF1-like.	0.998
LOC107904473	LOC107924173	A0A1U8JDM9	A0A1U8L5T7	Crooked neck-like protein 1.	Crooked neck-like protein 1.	0.900
LOC107904473	LOC107928342	A0A1U8JDM9	A0A1U8LPA0	Crooked neck-like protein 1.	Intron-binding protein aquarius-like isoform X1.	0.980
LOC107904473	LOC107947183	A0A1U8JDM9	A0A1U8NHG2	Crooked neck-like protein 1.	pre-mRNA-splicing factor syf2-like.	0.985
LOC107904473	LOC107947367	A0A1U8JDM9	A0A1U8NES6	Crooked neck-like protein 1.	Uncharacterized protein LOC107947367.	0.958
LOC107904473	LOC107949108	A0A1U8JDM9	A0A1U8NMZ4	Crooked neck-like protein 1.	pre-mRNA-splicing factor syf2-like.	0.985
LOC107904473	LOC107950582	A0A1U8JDM9	A0A1U8NSK7	Crooked neck-like protein 1.	pre-mRNA-splicing factor ISY1 homolog.	0.994
LOC107904473	LOC107962732	A0A1U8JDM9	A0A1U8PWG4	Crooked neck-like protein 1.	SNW/SKI-interacting protein.	0.988
LOC107913998	LOC107904473	A0A1U8KC12	A0A1U8JDM9	pre-mRNA-splicing factor SYF1-like.	Crooked neck-like protein 1.	0.998
LOC107913998	LOC107922165	A0A1U8KC12	A0A1U8KYM4	pre-mRNA-splicing factor SYF1-like.	Zinc finger CCCH domain-containing protein 40-like.	0.995
LOC107913998	LOC107924019	A0A1U8KC12	A0A1U8L555	pre-mRNA-splicing factor SYF1-like.	pre-mRNA-splicing factor SYF1-like.	0.900
LOC107913998	LOC107924173	A0A1U8KC12	A0A1U8L5T7	pre-mRNA-splicing factor SYF1-like.	Crooked neck-like protein 1.	0.998
LOC107913998	LOC107928342	A0A1U8KC12	A0A1U8LPA0	pre-mRNA-splicing factor SYF1-like.	Intron-binding protein aquarius-like isoform X1.	0.985
LOC107913998	LOC107947183	A0A1U8KC12	A0A1U8NHG2	pre-mRNA-splicing factor SYF1-like.	pre-mRNA-splicing factor syf2-like.	0.988
LOC107913998	LOC107947367	A0A1U8KC12	A0A1U8NES6	pre-mRNA-splicing factor SYF1-like.	Uncharacterized protein LOC107947367.	0.969
LOC107913998	LOC107949108	A0A1U8KC12	A0A1U8NMZ4	pre-mRNA-splicing factor SYF1-like.	pre-mRNA-splicing factor syf2-like.	0.988
LOC107913998	LOC107950582	A0A1U8KC12	A0A1U8NSK7	pre-mRNA-splicing factor SYF1-like.	pre-mRNA-splicing factor ISY1 homolog.	0.995
LOC107913998	LOC107962732	A0A1U8KC12	A0A1U8PWG4	pre-mRNA-splicing factor SYF1-like.	SNW/SKI-interacting protein.	0.987

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