STRINGSTRING
LOC107888647 LOC107888647 LOC107936541 LOC107936541 LOC107928336 LOC107928336 LOC107926886 LOC107926886 LOC107913436 LOC107913436 LOC107913303 LOC107913303 LOC107912994 LOC107912994 LOC107912807 LOC107912807 LOC107910678 LOC107910678 LOC107909450 LOC107909450 LOC107909111 LOC107909111 LOC107902779 LOC107902779 LOC107900610 LOC107900610 LOC107892765 LOC107892765 LOC107892295 LOC107892295 LOC107891536 LOC107891536 LOC107889188 LOC107889188 LOC107963862 LOC107963862 LOC107961952 LOC107961952 LOC107959211 LOC107959211 LOC107949838 LOC107949838
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107888647methyl-CpG-binding domain-containing protein 9-like. (2231 aa)
LOC107936541Transformation/transcription domain-associated protein-like; Belongs to the PI3/PI4-kinase family. (3876 aa)
LOC107928336Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like. (2043 aa)
LOC107926886SWR1-complex protein 4-like isoform X1. (455 aa)
LOC107913436SWR1 complex subunit 2-like. (181 aa)
LOC107913303RuvB-like helicase; Belongs to the RuvB family. (465 aa)
LOC107912994Transformation/transcription domain-associated protein-like; Belongs to the PI3/PI4-kinase family. (3889 aa)
LOC107912807Transformation/transcription domain-associated protein-like; Belongs to the PI3/PI4-kinase family. (3889 aa)
LOC107910678SWR1-complex protein 4-like isoform X1. (455 aa)
LOC107909450Transformation/transcription domain-associated protein-like; Belongs to the PI3/PI4-kinase family. (3876 aa)
LOC107909111Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like isoform X1. (2042 aa)
LOC107902779RuvB-like helicase; Belongs to the RuvB family. (445 aa)
LOC107900610SWR1 complex subunit 2-like isoform X1. (357 aa)
LOC107892765methyl-CpG-binding domain-containing protein 9-like. (136 aa)
LOC107892295methyl-CpG-binding domain-containing protein 9-like. (2223 aa)
LOC107891536RuvB-like helicase; Belongs to the RuvB family. (458 aa)
LOC107889188RuvB-like helicase; Belongs to the RuvB family. (458 aa)
LOC107963862SWR1 complex subunit 6-like. (172 aa)
LOC107961952SWR1 complex subunit 2-like. (357 aa)
LOC107959211RuvB-like helicase; Belongs to the RuvB family. (458 aa)
LOC107949838RuvB-like helicase; Belongs to the RuvB family. (465 aa)
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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