STRINGSTRING
LOC107919835 LOC107919835 LOC107920789 LOC107920789 LOC107920713 LOC107920713 LOC107918206 LOC107918206 LOC107917996 LOC107917996 LOC107916626 LOC107916626 LOC107915421 LOC107915421 LOC107914738 LOC107914738 LOC107914545 LOC107914545 LOC107915113 LOC107915113 LOC107913776 LOC107913776 LOC107913562 LOC107913562 LOC107914887 LOC107914887 LOC107913303 LOC107913303 LOC107913064 LOC107913064 LOC107912430 LOC107912430 LOC107913539 LOC107913539 LOC107912006 LOC107912006 LOC107911912 LOC107911912 LOC107912858 LOC107912858 LOC107912324 LOC107912324 LOC107912104 LOC107912104 LOC107911580 LOC107911580 LOC107909918 LOC107909918 LOC107910828 LOC107910828 LOC107910656 LOC107910656 LOC107910657 LOC107910657 LOC107909111 LOC107909111 LOC107909820 LOC107909820 LOC107909120 LOC107909120 LOC107908531 LOC107908531 LOC107908141 LOC107908141 LOC107906337 LOC107906337 LOC107886519 LOC107886519 LOC107887081 LOC107887081 LOC107888449 LOC107888449 LOC107888453 LOC107888453 LOC107889542 LOC107889542 LOC107906338 LOC107906338 LOC107905873 LOC107905873 LOC107905758 LOC107905758 LOC107905720 LOC107905720 LOC107905290 LOC107905290 LOC107899196 LOC107899196 LOC107902779 LOC107902779 LOC107898777 LOC107898777 LOC107897690 LOC107897690 LOC107896297 LOC107896297 LOC107894237 LOC107894237 LOC107895547 LOC107895547 LOC107893417 LOC107893417 LOC107892428 LOC107892428 LOC107891536 LOC107891536 LOC107891390 LOC107891390 LOC107891290 LOC107891290 LOC107889188 LOC107889188 LOC107890498 LOC107890498 LOC107890466 LOC107890466 LOC107888519 LOC107888519 LOC107887642 LOC107887642 LOC107889829 LOC107889829 LOC107963805 LOC107963805 LOC107959741 LOC107959741 LOC107959639 LOC107959639 LOC107958509 LOC107958509 LOC107959211 LOC107959211 LOC107958417 LOC107958417 LOC107954400 LOC107954400 LOC107944775 LOC107944775 LOC107945952 LOC107945952 LOC107946537 LOC107946537 LOC107948602 LOC107948602 LOC107949838 LOC107949838 LOC107951232 LOC107951232 LOC107952774 LOC107952774 LOC107944568 LOC107944568 LOC107943820 LOC107943820 LOC107943381 LOC107943381 LOC107941746 LOC107941746 LOC107942638 LOC107942638 LOC107940857 LOC107940857 LOC107939819 LOC107939819 LOC107938545 LOC107938545 LOC107938484 LOC107938484 LOC107938485 LOC107938485 LOC107939143 LOC107939143 LOC107937982 LOC107937982 LOC107938861 LOC107938861 LOC107937350 LOC107937350 LOC107935920 LOC107935920 LOC107934687 LOC107934687 LOC107934478 LOC107934478 LOC107931919 LOC107931919 LOC107931442 LOC107931442 LOC107929048 LOC107929048 LOC107929428 LOC107929428 LOC107929280 LOC107929280 LOC107928980 LOC107928980 LOC107928427 LOC107928427 LOC107927199 LOC107927199 LOC107928336 LOC107928336 LOC107927308 LOC107927308 LOC107926069 LOC107926069 LOC107924629 LOC107924629 LOC107926688 LOC107926688 LOC107925403 LOC107925403 LOC107924650 LOC107924650 LOC107925687 LOC107925687 LOC107924100 LOC107924100 LOC107923870 LOC107923870 LOC107923790 LOC107923790 LOC107923117 LOC107923117 LOC107924032 LOC107924032 LOC107923752 LOC107923752 LOC107922502 LOC107922502 LOC107921384 LOC107921384
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107919835ATP-dependent DNA helicase Q-like 4A isoform X1. (1203 aa)
LOC107920789DNA helicase; Belongs to the MCM family. (839 aa)
LOC107920713Uncharacterized protein LOC107920713. (137 aa)
LOC107918206DNA repair helicase XPB1-like. (114 aa)
LOC107917996ATP-dependent DNA helicase 2 subunit KU70-like. (624 aa)
LOC107916626ATP-dependent DNA helicase Q-like 5 isoform X1. (925 aa)
LOC107915421ATPase WRNIP1-like. (555 aa)
LOC107914738Glutamic acid-rich protein-like. (546 aa)
LOC107914545DNA repair helicase XPD-like. (758 aa)
LOC107915113Splicing regulatory glutamine/lysine-rich protein 1-like. (540 aa)
LOC107913776DNA helicase; Belongs to the MCM family. (758 aa)
LOC107913562DNA-binding protein SMUBP-2-like. (1000 aa)
LOC107914887Probable ATP-dependent DNA helicase CHR12. (1114 aa)
LOC107913303RuvB-like helicase; Belongs to the RuvB family. (465 aa)
LOC107913064Uncharacterized protein LOC107913064. (469 aa)
LOC107912430DNA repair helicase XPD-like. (758 aa)
LOC107913539DNA helicase; Belongs to the MCM family. (839 aa)
LOC107912006Uncharacterized protein LOC107912006. (475 aa)
LOC107911912LOW QUALITY PROTEIN: ATP-dependent DNA helicase 2 subunit KU80-like. (628 aa)
LOC107912858ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (733 aa)
LOC107912324DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (718 aa)
LOC107912104Uncharacterized ATP-dependent helicase YprA-like isoform X1. (1217 aa)
LOC107911580ATP-dependent helicase BRM-like isoform X1. (2247 aa)
LOC107909918ATP-dependent DNA helicase homolog RECG, chloroplastic-like. (1028 aa)
LOC107910828ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase. (678 aa)
LOC107910656DNA helicase; Belongs to the MCM family. (840 aa)
LOC107910657DNA replication licensing factor MCM2-like. (82 aa)
LOC107909111Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like isoform X1. (2042 aa)
LOC107909820Uncharacterized protein LOC107909820. (1141 aa)
LOC107909120ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (711 aa)
LOC107908531DNA helicase; Belongs to the MCM family. (822 aa)
LOC107908141Organ-specific protein P4-like. (110 aa)
LOC107906337Twinkle homolog protein, chloroplastic/mitochondrial. (704 aa)
LOC107886519Uncharacterized protein LOC107886519. (1141 aa)
LOC107887081ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (611 aa)
LOC107888449ATP-dependent DNA helicase At3g02060, chloroplastic-like. (825 aa)
LOC107888453DNA helicase; Belongs to the MCM family. (935 aa)
LOC107889542DNA-binding protein SMUBP-2-like. (649 aa)
LOC107906338Primase homolog protein isoform X1. (469 aa)
LOC107905873DNA helicase; Belongs to the MCM family. (758 aa)
LOC107905758Fanconi anemia group J protein-like isoform X1. (1221 aa)
LOC107905720Fanconi anemia group J protein homolog isoform X1. (1221 aa)
LOC107905290Probable DNA helicase MCM8 isoform X1; Belongs to the MCM family. (793 aa)
LOC107899196Protein downstream neighbor of Son-like. (620 aa)
LOC107902779RuvB-like helicase; Belongs to the RuvB family. (445 aa)
LOC107898777Transcription-repair-coupling factor-like. (192 aa)
LOC107897690Probable ATP-dependent DNA helicase CHR12. (1115 aa)
LOC107896297DNA replication ATP-dependent helicase/nuclease DNA2-like isoform X1. (1363 aa)
LOC107894237ATP-dependent DNA helicase Q-like 4A isoform X1. (1222 aa)
LOC107895547ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (733 aa)
LOC107893417DNA helicase; Belongs to the MCM family. (734 aa)
LOC107892428DNA replication licensing factor MCM5-like. (315 aa)
LOC107891536RuvB-like helicase; Belongs to the RuvB family. (458 aa)
LOC107891390DNA-binding protein SMUBP-2-like. (1003 aa)
LOC107891290DNA-binding protein SMUBP-2-like. (649 aa)
LOC107889188RuvB-like helicase; Belongs to the RuvB family. (458 aa)
LOC107890498Myb-like protein X. (539 aa)
LOC107890466DNA replication licensing factor MCM5-like isoform X1; Belongs to the MCM family. (291 aa)
LOC107888519DNA helicase; Belongs to the MCM family. (935 aa)
LOC107887642ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (882 aa)
LOC107889829ATP-dependent DNA helicase At3g02060, chloroplastic-like. (738 aa)
LOC107963805DNA repair helicase XPB1-like. (312 aa)
LOC107959741DExH-box ATP-dependent RNA helicase DExH6-like isoform X1. (1219 aa)
LOC107959639DExH-box ATP-dependent RNA helicase DExH6-like. (1220 aa)
LOC107958509Twinkle homolog protein, chloroplastic/mitochondrial-like isoform X1. (704 aa)
LOC107959211RuvB-like helicase; Belongs to the RuvB family. (458 aa)
LOC107958417Uncharacterized protein LOC107958417. (469 aa)
LOC107954400Fanconi anemia group J protein homolog. (103 aa)
LOC107944775ATP-dependent DNA helicase; Belongs to the helicase family. (751 aa)
LOC107945952Protein BPS1, chloroplastic-like. (352 aa)
LOC107946537LOW QUALITY PROTEIN: DExH-box ATP-dependent RNA helicase DExH14-like. (2076 aa)
LOC107948602LOW QUALITY PROTEIN: DNA replication ATP-dependent helicase/nuclease DNA2-like. (1351 aa)
LOC107949838RuvB-like helicase; Belongs to the RuvB family. (465 aa)
LOC107951232DExH-box ATP-dependent RNA helicase DExH14-like isoform X1. (2089 aa)
LOC107952774ATP-dependent helicase BRM. (2245 aa)
LOC107944568ATP-dependent helicase BRM-like. (2076 aa)
LOC107943820Uncharacterized protein LOC107943820. (319 aa)
LOC107943381Uncharacterized ATP-dependent helicase YprA-like isoform X1. (1220 aa)
LOC107941746ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase. (686 aa)
LOC107942638DNA helicase; Belongs to the MCM family. (790 aa)
LOC107940857DNA replication licensing factor MCM5-like. (83 aa)
LOC107939819LOW QUALITY PROTEIN: ATP-dependent DNA helicase SRS2-like protein At4g25120. (1117 aa)
LOC107938545DNA repair helicase XPB1-like isoform X1. (103 aa)
LOC107938484DNA replication licensing factor MCM6-like. (270 aa)
LOC107938485DNA replication licensing factor MCM6-like; Belongs to the MCM family. (484 aa)
LOC107939143Myb-like protein X isoform X1. (541 aa)
LOC107937982DNA helicase; Belongs to the MCM family. (734 aa)
LOC107938861Organ-specific protein P4-like. (110 aa)
LOC107937350Regulator of telomere elongation helicase 1-like isoform X1. (1012 aa)
LOC107935920DNA helicase; Belongs to the MCM family. (758 aa)
LOC107934687ATP-dependent DNA helicase 2 subunit KU70-like. (624 aa)
LOC107934478DEAD-box ATP-dependent RNA helicase 42-like isoform X1. (563 aa)
LOC107931919ATP-dependent DNA helicase homolog RECG, chloroplastic-like. (1026 aa)
LOC107931442ATP-dependent DNA helicase SRS2-like protein At4g25120. (1141 aa)
LOC107929048Probable DNA helicase MCM9 isoform X1; Belongs to the MCM family. (667 aa)
LOC107929428Probable DNA helicase MCM9; Belongs to the MCM family. (374 aa)
LOC107929280LOW QUALITY PROTEIN: DNA repair helicase XPB1-like. (770 aa)
LOC107928980DExH-box ATP-dependent RNA helicase DExH16, mitochondrial-like. (563 aa)
LOC107928427DExH-box ATP-dependent RNA helicase DExH16, mitochondrial. (563 aa)
LOC107927199ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (611 aa)
LOC107928336Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like. (2043 aa)
LOC107927308ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (882 aa)
LOC107926069DExH-box ATP-dependent RNA helicase DExH17 isoform X1. (1218 aa)
LOC107924629DNA repair helicase XPB1-like isoform X1. (775 aa)
LOC107926688ATP-dependent DNA helicase DDM1 isoform X1. (753 aa)
LOC107925403Organ-specific protein P4-like. (108 aa)
LOC107924650DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (718 aa)
LOC107925687Protein downstream neighbor of Son-like. (621 aa)
LOC107924100Regulator of telomere elongation helicase 1-like isoform X1. (1024 aa)
LOC107923870Protein BPS1, chloroplastic-like. (347 aa)
LOC107923790LOW QUALITY PROTEIN: ATP-dependent helicase BRM-like. (2158 aa)
LOC107923117Uncharacterized protein LOC107923117. (475 aa)
LOC107924032DNA repair helicase XPD. (758 aa)
LOC107923752Protein BPS1, chloroplastic-like. (352 aa)
LOC107922502ATP-dependent DNA helicase Q-like 5 isoform X1. (945 aa)
LOC107921384Organ-specific protein P4-like. (108 aa)
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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