STRINGSTRING
LOC107952113 LOC107952113 LOC107913539 LOC107913539 LOC107916232 LOC107916232 LOC107913234 LOC107913234 LOC107912324 LOC107912324 LOC107910656 LOC107910656 LOC107910657 LOC107910657 LOC107910013 LOC107910013 LOC107908531 LOC107908531 LOC107905873 LOC107905873 LOC107903981 LOC107903981 LOC107903900 LOC107903900 LOC107900442 LOC107900442 LOC107898021 LOC107898021 LOC107896602 LOC107896602 LOC107897934 LOC107897934 LOC107893417 LOC107893417 LOC107892428 LOC107892428 LOC107890466 LOC107890466 LOC107888519 LOC107888519 LOC107888453 LOC107888453 LOC107886366 LOC107886366 LOC107913776 LOC107913776 LOC107916885 LOC107916885 LOC107920789 LOC107920789 LOC107921247 LOC107921247 LOC107924650 LOC107924650 LOC107925704 LOC107925704 LOC107928765 LOC107928765 LOC107935553 LOC107935553 LOC107935512 LOC107935512 LOC107935920 LOC107935920 LOC107937982 LOC107937982 LOC107938485 LOC107938485 LOC107938484 LOC107938484 LOC107940023 LOC107940023 LOC107940857 LOC107940857 LOC107942638 LOC107942638 LOC107950364 LOC107950364 LOC107951878 LOC107951878
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107952113DNA topoisomerase 2-binding protein 1-A-like. (985 aa)
LOC107913539DNA helicase; Belongs to the MCM family. (839 aa)
LOC107916232DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. (231 aa)
LOC107913234DNA polymerase. (1531 aa)
LOC107912324DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (718 aa)
LOC107910656DNA helicase; Belongs to the MCM family. (840 aa)
LOC107910657DNA replication licensing factor MCM2-like. (82 aa)
LOC107910013Probable DNA primase large subunit. (452 aa)
LOC107908531DNA helicase; Belongs to the MCM family. (822 aa)
LOC107905873DNA helicase; Belongs to the MCM family. (758 aa)
LOC107903981DNA topoisomerase 2-binding protein 1-A-like isoform X1. (985 aa)
LOC107903900DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (623 aa)
LOC107900442DNA replication complex GINS protein PSF3-like isoform X1. (185 aa)
LOC107898021DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (623 aa)
LOC107896602DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. (231 aa)
LOC107897934DNA polymerase. (1531 aa)
LOC107893417DNA helicase; Belongs to the MCM family. (734 aa)
LOC107892428DNA replication licensing factor MCM5-like. (315 aa)
LOC107890466DNA replication licensing factor MCM5-like isoform X1; Belongs to the MCM family. (291 aa)
LOC107888519DNA helicase; Belongs to the MCM family. (935 aa)
LOC107888453DNA helicase; Belongs to the MCM family. (935 aa)
LOC107886366Probable DNA primase large subunit. (452 aa)
LOC107913776DNA helicase; Belongs to the MCM family. (758 aa)
LOC107916885Protein MCM10 homolog isoform X1. (401 aa)
LOC107920789DNA helicase; Belongs to the MCM family. (839 aa)
LOC107921247Protein MCM10 homolog. (401 aa)
LOC107924650DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (718 aa)
LOC107925704Cell division control protein 45 homolog. (595 aa)
LOC107928765Cell division control protein; Belongs to the CDC6/cdc18 family. (509 aa)
LOC107935553Origin of replication complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication; Belongs to the ORC4 family. (421 aa)
LOC107935512Origin of replication complex subunit 4-like. (167 aa)
LOC107935920DNA helicase; Belongs to the MCM family. (758 aa)
LOC107937982DNA helicase; Belongs to the MCM family. (734 aa)
LOC107938485DNA replication licensing factor MCM6-like; Belongs to the MCM family. (484 aa)
LOC107938484DNA replication licensing factor MCM6-like. (270 aa)
LOC107940023Origin of replication complex subunit 3-like isoform X1. (724 aa)
LOC107940857DNA replication licensing factor MCM5-like. (83 aa)
LOC107942638DNA helicase; Belongs to the MCM family. (790 aa)
LOC107950364Cell division control protein; Belongs to the CDC6/cdc18 family. (509 aa)
LOC107951878Origin of replication complex subunit 3-like isoform X1. (724 aa)
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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