16 items (Gossypium hirsutum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107909111	Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like isoform X1. (2042 aa)
	LOC107900610	SWR1 complex subunit 2-like isoform X1. (357 aa)
	LOC107909350	Protein HGV2-like. (480 aa)
	LOC107910678	SWR1-complex protein 4-like isoform X1. (455 aa)
	LOC107911078	Uncharacterized protein LOC107911078. (254 aa)
	LOC107911997	Nuclear autoantigenic sperm protein-like. (481 aa)
	LOC107913120	Uncharacterized protein LOC107913120. (152 aa)
	LOC107913436	SWR1 complex subunit 2-like. (181 aa)
	LOC107926886	SWR1-complex protein 4-like isoform X1. (455 aa)
	LOC107928336	Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like. (2043 aa)
	LOC107941468	Mitotic-spindle organizing protein 1B-like isoform X1. (100 aa)
	LOC107953133	Mitotic-spindle organizing protein 1A-like isoform X1. (82 aa)
	LOC107954232	Mitotic-spindle organizing protein 1B-like isoform X1. (82 aa)
	LOC107958535	Protein HGV2-like. (239 aa)
	LOC107961952	SWR1 complex subunit 2-like. (357 aa)
	LOC107963862	SWR1 complex subunit 6-like. (172 aa)

Your Current Organism:

Gossypium hirsutum

NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC107900610	LOC107909111	A0A1U8IUL5	A0A1U8JTA8	SWR1 complex subunit 2-like isoform X1.	Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like isoform X1.	0.934
LOC107900610	LOC107910678	A0A1U8IUL5	A0A1U8JV24	SWR1 complex subunit 2-like isoform X1.	SWR1-complex protein 4-like isoform X1.	0.968
LOC107900610	LOC107926886	A0A1U8IUL5	A0A1U8LFA9	SWR1 complex subunit 2-like isoform X1.	SWR1-complex protein 4-like isoform X1.	0.968
LOC107900610	LOC107928336	A0A1U8IUL5	A0A1U8LKA3	SWR1 complex subunit 2-like isoform X1.	Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like.	0.934
LOC107900610	LOC107963862	A0A1U8IUL5	A0A1U8PXI1	SWR1 complex subunit 2-like isoform X1.	SWR1 complex subunit 6-like.	0.952
LOC107909111	LOC107900610	A0A1U8JTA8	A0A1U8IUL5	Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like isoform X1.	SWR1 complex subunit 2-like isoform X1.	0.934
LOC107909111	LOC107910678	A0A1U8JTA8	A0A1U8JV24	Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like isoform X1.	SWR1-complex protein 4-like isoform X1.	0.977
LOC107909111	LOC107913436	A0A1U8JTA8	A0A1U8K956	Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like isoform X1.	SWR1 complex subunit 2-like.	0.934
LOC107909111	LOC107926886	A0A1U8JTA8	A0A1U8LFA9	Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like isoform X1.	SWR1-complex protein 4-like isoform X1.	0.977
LOC107909111	LOC107928336	A0A1U8JTA8	A0A1U8LKA3	Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like isoform X1.	Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like.	0.542
LOC107909111	LOC107961952	A0A1U8JTA8	A0A1U8PR21	Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like isoform X1.	SWR1 complex subunit 2-like.	0.934
LOC107909111	LOC107963862	A0A1U8JTA8	A0A1U8PXI1	Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like isoform X1.	SWR1 complex subunit 6-like.	0.976
LOC107910678	LOC107900610	A0A1U8JV24	A0A1U8IUL5	SWR1-complex protein 4-like isoform X1.	SWR1 complex subunit 2-like isoform X1.	0.968
LOC107910678	LOC107909111	A0A1U8JV24	A0A1U8JTA8	SWR1-complex protein 4-like isoform X1.	Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like isoform X1.	0.977
LOC107910678	LOC107913436	A0A1U8JV24	A0A1U8K956	SWR1-complex protein 4-like isoform X1.	SWR1 complex subunit 2-like.	0.968
LOC107910678	LOC107926886	A0A1U8JV24	A0A1U8LFA9	SWR1-complex protein 4-like isoform X1.	SWR1-complex protein 4-like isoform X1.	0.543
LOC107910678	LOC107928336	A0A1U8JV24	A0A1U8LKA3	SWR1-complex protein 4-like isoform X1.	Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like.	0.977
LOC107910678	LOC107961952	A0A1U8JV24	A0A1U8PR21	SWR1-complex protein 4-like isoform X1.	SWR1 complex subunit 2-like.	0.968
LOC107910678	LOC107963862	A0A1U8JV24	A0A1U8PXI1	SWR1-complex protein 4-like isoform X1.	SWR1 complex subunit 6-like.	0.978
LOC107913436	LOC107909111	A0A1U8K956	A0A1U8JTA8	SWR1 complex subunit 2-like.	Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like isoform X1.	0.934

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