STRINGSTRING
LOC107911828 LOC107911828 LOC107914874 LOC107914874 LOC107916232 LOC107916232 LOC107961886 LOC107961886 LOC107948054 LOC107948054 LOC107896602 LOC107896602 LOC107898187 LOC107898187 LOC107923104 LOC107923104 LOC107927280 LOC107927280 LOC107934367 LOC107934367 LOC107940962 LOC107940962 LOC107943595 LOC107943595 LOC107900442 LOC107900442 LOC107889642 LOC107889642 LOC107891703 LOC107891703 LOC107892263 LOC107892263 LOC107904511 LOC107904511 LOC107906483 LOC107906483
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107911828Pentatricopeptide repeat-containing protein At5g39350-like isoform X1. (719 aa)
LOC107914874DNA replication complex GINS protein PSF1. (200 aa)
LOC107916232DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. (231 aa)
LOC107961886Wall-associated receptor kinase-like 20. (636 aa)
LOC107948054Wall-associated receptor kinase-like 15. (627 aa)
LOC107896602DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. (231 aa)
LOC107898187Wall-associated receptor kinase-like 15. (627 aa)
LOC107923104Pentatricopeptide repeat-containing protein At5g39350-like. (665 aa)
LOC107927280Wall-associated receptor kinase-like 20. (203 aa)
LOC107934367DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family. (209 aa)
LOC107940962Probable DNA replication complex GINS protein PSF1. (151 aa)
LOC107943595Wall-associated receptor kinase-like 20 isoform X1. (630 aa)
LOC107900442DNA replication complex GINS protein PSF3-like isoform X1. (185 aa)
LOC107889642Wall-associated receptor kinase-like 20. (635 aa)
LOC107891703Methyltransferase-like protein 22. (334 aa)
LOC107892263Wall-associated receptor kinase-like 20. (694 aa)
LOC107904511Wall-associated receptor kinase-like 20. (203 aa)
LOC107906483Probable DNA replication complex GINS protein PSF1 isoform X1. (204 aa)
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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