STRINGSTRING
LOC107889174 LOC107889174 LOC107891521 LOC107891521 LOC107904473 LOC107904473 LOC107913998 LOC107913998 LOC107922165 LOC107922165 LOC107924019 LOC107924019 LOC107924173 LOC107924173 LOC107938433 LOC107938433 LOC107941271 LOC107941271 LOC107947068 LOC107947068 LOC107949762 LOC107949762
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107889174116 kDa U5 small nuclear ribonucleoprotein component-like. (990 aa)
LOC107891521116 kDa U5 small nuclear ribonucleoprotein component-like. (990 aa)
LOC107904473Crooked neck-like protein 1. (705 aa)
LOC107913998pre-mRNA-splicing factor SYF1-like. (913 aa)
LOC107922165Zinc finger CCCH domain-containing protein 40-like. (503 aa)
LOC107924019pre-mRNA-splicing factor SYF1-like. (913 aa)
LOC107924173Crooked neck-like protein 1. (705 aa)
LOC107938433116 kDa U5 small nuclear ribonucleoprotein component-like. (990 aa)
LOC107941271116 kDa U5 small nuclear ribonucleoprotein component-like. (990 aa)
LOC107947068Elongation factor-like GTPase 1. (1027 aa)
LOC107949762pre-mRNA-splicing factor CLF1-like. (131 aa)
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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