40 items (Gossypium hirsutum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107919516	Adagio protein 1. (605 aa)
	LOC107919822	Phototropin-2-like isoform X1. (987 aa)
	LOC107918113	Adagio protein 3-like. (627 aa)
	LOC107922146	Adagio protein 3-like isoform X1. (629 aa)
	LOC107924054	Phototropin-2-like. (995 aa)
	LOC107923974	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1123 aa)
	LOC107926267	Adagio protein 1-like. (610 aa)
	LOC107926508	Uncharacterized protein LOC107926508 isoform X1. (777 aa)
	LOC107929200	Dual specificity protein kinase shkD-like isoform X1. (747 aa)
	LOC107929708	Phototropin-2-like. (995 aa)
	LOC107935905	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1127 aa)
	LOC107938666	Serine/threonine-protein kinase PAK 3-like isoform X1. (740 aa)
	LOC107888301	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1122 aa)
	LOC107885966	Phototropin-1-like. (1020 aa)
	LOC107888960	Serine/threonine-protein kinase EDR1-like. (765 aa)
	LOC107887875	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1123 aa)
	LOC107893266	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1122 aa)
	LOC107891917	Probable serine/threonine-protein kinase DDB_G0282963. (765 aa)
	LOC107894012	Phototropin-2-like isoform X1. (956 aa)
	LOC107894982	Protein TWIN LOV 1 isoform X1. (391 aa)
	LOC107896596	Uncharacterized protein LOC107896596 isoform X1. (775 aa)
	LOC107896595	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1142 aa)
	LOC107903633	Adagio protein 3-like isoform X1. (632 aa)
	LOC107907349	Adagio protein 1-like. (610 aa)
	LOC107907495	Adagio protein 1-like. (610 aa)
	LOC107908051	RGS domain-containing serine/threonine-protein kinase A-like. (670 aa)
	LOC107910572	Dual specificity protein kinase shkD-like. (737 aa)
	LOC107911084	Phytochrome E-like. (639 aa)
	LOC107912456	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1123 aa)
	LOC107916208	Phytochrome B apoprotein. (1193 aa)
	LOC107916211	Probable serine/threonine-protein kinase DDB_G0282963 isoform X1. (775 aa)
	LOC107939622	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1123 aa)
	LOC107938654	Dual specificity protein kinase shkD-like isoform X1. (738 aa)
	LOC107940996	Phototropin-2-like isoform X1. (1013 aa)
	LOC107944532	Biofilm dispersion protein BdlA-like. (600 aa)
	LOC107944531	Uncharacterized signaling protein CC_0091-like. (662 aa)
	LOC107946295	Adagio protein 3-like. (627 aa)
	LOC107950311	Phototropin-1. (1004 aa)
	LOC107959067	Phototropin-1-like isoform X1. (993 aa)
	LOC107963761	Dual specificity protein kinase shkD-like isoform X1. (748 aa)

Your Current Organism:

Gossypium hirsutum

NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC107885966	LOC107896595	A0A1U8HPM0	A0A1U8IGR3	Phototropin-1-like.	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.	0.413
LOC107885966	LOC107916208	A0A1U8HPM0	A0A1U8KEL4	Phototropin-1-like.	Phytochrome B apoprotein.	0.413
LOC107887875	LOC107888301	A0A1U8HW67	A0A1U8HP97	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.	0.900
LOC107887875	LOC107893266	A0A1U8HW67	A0A1U8I630	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.	0.900
LOC107887875	LOC107896595	A0A1U8HW67	A0A1U8IGR3	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.	0.501
LOC107887875	LOC107903633	A0A1U8HW67	A0A1U8JAH4	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.	Adagio protein 3-like isoform X1.	0.433
LOC107887875	LOC107907349	A0A1U8HW67	A0A1U8JIT2	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.	Adagio protein 1-like.	0.415
LOC107887875	LOC107907495	A0A1U8HW67	A0A1U8JNU8	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.	Adagio protein 1-like.	0.415
LOC107887875	LOC107916208	A0A1U8HW67	A0A1U8KEL4	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.	Phytochrome B apoprotein.	0.501
LOC107887875	LOC107918113	A0A1U8HW67	A0A1U8KQX7	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.	Adagio protein 3-like.	0.433
LOC107887875	LOC107919516	A0A1U8HW67	A0A1U8KPQ0	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.	Adagio protein 1.	0.415
LOC107887875	LOC107922146	A0A1U8HW67	A0A1U8KYJ2	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.	Adagio protein 3-like isoform X1.	0.433
LOC107887875	LOC107926267	A0A1U8HW67	A0A1U8LD70	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.	Adagio protein 1-like.	0.415
LOC107887875	LOC107939622	A0A1U8HW67	A0A1U8MNT3	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.	0.900
LOC107887875	LOC107946295	A0A1U8HW67	A0A1U8NAE9	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.	Adagio protein 3-like.	0.433
LOC107888301	LOC107887875	A0A1U8HP97	A0A1U8HW67	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.	0.900
LOC107888301	LOC107893266	A0A1U8HP97	A0A1U8I630	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.	0.900
LOC107888301	LOC107896595	A0A1U8HP97	A0A1U8IGR3	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.	0.502
LOC107888301	LOC107903633	A0A1U8HP97	A0A1U8JAH4	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.	Adagio protein 3-like isoform X1.	0.433
LOC107888301	LOC107907349	A0A1U8HP97	A0A1U8JIT2	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.	Adagio protein 1-like.	0.415

page 1 of 10

Server load: low (24%) [HD]

Permalink

Network

Cooccurrence

Experiments

Neighborhood

Databases

Fusion

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About