STRINGSTRING
EF1A3 EF1A3 EF1A2 EF1A2 LOC107935157 LOC107935157 LOC107934354 LOC107934354 LOC107933381 LOC107933381 LOC107933369 LOC107933369 LOC107932666 LOC107932666 LOC107931493 LOC107931493 LOC107930346 LOC107930346 LOC107927981 LOC107927981 LOC107924445 LOC107924445 LOC107924550 LOC107924550 LOC107924124 LOC107924124 LOC107924010 LOC107924010 LOC107922221 LOC107922221 LOC107922011 LOC107922011 LOC107920137 LOC107920137 LOC107919778 LOC107919778 LOC107934447 LOC107934447 LOC107892371 LOC107892371 LOC107891860 LOC107891860 LOC107892331 LOC107892331 LOC107891861 LOC107891861 LOC107891521 LOC107891521 LOC107891174 LOC107891174 LOC107890842 LOC107890842 LOC107889174 LOC107889174 LOC107886901 LOC107886901 LOC107886828 LOC107886828 LOC107886217 LOC107886217 LOC107886208 LOC107886208 LOC107935464 LOC107935464 LOC107935918 LOC107935918 LOC107941271 LOC107941271 LOC107941133 LOC107941133 LOC107939239 LOC107939239 LOC107939907 LOC107939907 LOC107898138 LOC107898138 LOC107898684 LOC107898684 LOC107899443 LOC107899443 LOC107899669 LOC107899669 LOC107898638 LOC107898638 LOC107898132 LOC107898132 LOC107936138 LOC107936138 LOC107936898 LOC107936898 LOC107937726 LOC107937726 LOC107938433 LOC107938433 LOC107937919 LOC107937919 LOC107917847 LOC107917847 LOC107913147 LOC107913147 LOC107912934 LOC107912934 LOC107910462 LOC107910462 LOC107908626 LOC107908626 LOC107906768 LOC107906768 LOC107905285 LOC107905285 LOC107903816 LOC107903816 LOC107904925 LOC107904925 LOC107904667 LOC107904667 LOC107904509 LOC107904509 LOC107898985 LOC107898985 LOC107902013 LOC107902013 LOC107900454 LOC107900454 LOC107894589 LOC107894589 LOC107895288 LOC107895288 LOC107893116 LOC107893116 LOC107942133 LOC107942133 LOC107943200 LOC107943200 LOC107944498 LOC107944498 LOC107945364 LOC107945364 LOC107947068 LOC107947068 LOC107947101 LOC107947101 LOC107947080 LOC107947080 LOC107948434 LOC107948434 LOC107949645 LOC107949645 LOC107951615 LOC107951615 LOC107951544 LOC107951544 LOC107952309 LOC107952309 LOC107953215 LOC107953215 LOC107954596 LOC107954596 LOC107957148 LOC107957148 LOC107957707 LOC107957707 LOC107958029 LOC107958029 LOC107959688 LOC107959688 LOC107959777 LOC107959777 LOC107961757 LOC107961757 LOC107962043 LOC107962043 LOC107962356 LOC107962356 LOC107961760 LOC107961760 LOC107962309 LOC107962309 EF1A6 EF1A6 EF1A5 EF1A5 EF1A4 EF1A4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EF1A3Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (448 aa)
EF1A2Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (447 aa)
LOC107935157alanine--tRNA ligase-like isoform X1. (302 aa)
LOC107934354GTP-binding protein TypA/BipA homolog. (665 aa)
LOC10793338160S ribosomal protein L3-2-like; Belongs to the universal ribosomal protein uL3 family. (389 aa)
LOC107933369Eukaryotic translation initiation factor 5B-like. (1365 aa)
LOC107932666Elongation factor 2-like. (843 aa)
LOC107931493alanine--tRNA ligase-like isoform X1. (259 aa)
LOC107930346Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (453 aa)
LOC107927981Probable alanine--tRNA ligase, chloroplastic; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family. (999 aa)
LOC107924445Eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like isoform X1. (511 aa)
LOC107924550Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (448 aa)
LOC107924124Elongation factor G, chloroplastic; Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl- tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (783 aa)
LOC107924010Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (753 aa)
LOC10792222160S ribosomal protein L3-2-like isoform X1. (117 aa)
LOC107922011Translation initiation factor IF-2, chloroplastic-like isoform X1. (995 aa)
LOC107920137H/ACA ribonucleoprotein complex non-core subunit NAF1-like. (695 aa)
LOC107919778Elongation factor 2. (843 aa)
LOC107934447Translation initiation factor IF-2, chloroplastic-like. (201 aa)
LOC107892371Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (663 aa)
LOC107891860Eukaryotic translation initiation factor 2 subunit gamma-like. (464 aa)
LOC107892331Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (663 aa)
LOC107891861Eukaryotic translation initiation factor 2 subunit 3-like. (374 aa)
LOC107891521116 kDa U5 small nuclear ribonucleoprotein component-like. (990 aa)
LOC107891174Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (447 aa)
LOC107890842Eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like isoform X1. (514 aa)
LOC107889174116 kDa U5 small nuclear ribonucleoprotein component-like. (990 aa)
LOC107886901Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family. (1015 aa)
LOC107886828Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family. (1015 aa)
LOC107886217Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (485 aa)
LOC107886208Elongation factor 2-like. (843 aa)
LOC10793546460S ribosomal protein L35a-1. (112 aa)
LOC107935918Uncharacterized protein LOC107935918. (668 aa)
LOC107941271116 kDa U5 small nuclear ribonucleoprotein component-like. (990 aa)
LOC107941133Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (824 aa)
LOC107939239GTP-binding protein TypA/BipA homolog. (680 aa)
LOC10793990760S ribosomal protein L35a-3-like. (112 aa)
LOC107898138H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (186 aa)
LOC10789868460S ribosomal protein L3-2; Belongs to the universal ribosomal protein uL3 family. (389 aa)
LOC107899443Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (449 aa)
LOC107899669Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (447 aa)
LOC107898638Eukaryotic translation initiation factor 5B-like. (1361 aa)
LOC107898132Eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like. (536 aa)
LOC107936138Eukaryotic translation initiation factor 2 subunit 3-like. (464 aa)
LOC107936898Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (454 aa)
LOC10793772650S ribosomal protein L3, chloroplastic-like; Belongs to the universal ribosomal protein uL3 family. (275 aa)
LOC107938433116 kDa U5 small nuclear ribonucleoprotein component-like. (990 aa)
LOC107937919HBS1-like protein isoform X1. (775 aa)
LOC107917847Translation initiation factor IF-2, chloroplastic-like. (992 aa)
LOC107913147Uncharacterized protein LOC107913147. (668 aa)
LOC107912934Elongation factor 2-like. (843 aa)
LOC10791046260S ribosomal protein L3-like; Belongs to the universal ribosomal protein uL3 family. (389 aa)
LOC107908626Probable alanine--tRNA ligase, chloroplastic; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family. (1002 aa)
LOC107906768HBS1-like protein isoform X1. (774 aa)
LOC107905285Elongation factor 1-alpha-like isoform X1. (516 aa)
LOC107903816Elongation factor 2-like. (843 aa)
LOC10790492560S ribosomal protein L3-like; Belongs to the universal ribosomal protein uL3 family. (389 aa)
LOC107904667Eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like isoform X1. (515 aa)
LOC107904509Elongation factor G, chloroplastic; Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl- tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (783 aa)
LOC107898985Translation initiation factor IF-2, chloroplastic-like. (92 aa)
LOC107902013HBS1-like protein isoform X1. (681 aa)
LOC10790045460S ribosomal protein L35a-1-like. (112 aa)
LOC107894589H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (193 aa)
LOC107895288H/ACA ribonucleoprotein complex non-core subunit NAF1-like. (691 aa)
LOC10789311650S ribosomal protein L3, chloroplastic-like; Belongs to the universal ribosomal protein uL3 family. (275 aa)
LOC107942133Elongation factor G-like. (497 aa)
LOC10794320060S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (389 aa)
LOC107944498Eukaryotic translation initiation factor 2 subunit 3-like isoform X2. (464 aa)
LOC107945364GTP-binding protein TypA/BipA homolog. (680 aa)
LOC107947068Elongation factor-like GTPase 1. (1027 aa)
LOC107947101Translation initiation factor IF-2-like. (698 aa)
LOC107947080Translation initiation factor IF-2. (725 aa)
LOC107948434Elongation factor 2. (843 aa)
LOC107949645Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (485 aa)
LOC10795161560S ribosomal protein L3-like; Belongs to the universal ribosomal protein uL3 family. (237 aa)
LOC10795154450S ribosomal protein L3-2, chloroplastic-like; Belongs to the universal ribosomal protein uL3 family. (322 aa)
LOC10795230960S ribosomal protein L3-2-like. (97 aa)
LOC107953215Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (447 aa)
LOC107954596Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (755 aa)
LOC107957148Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (449 aa)
LOC10795770760S ribosomal protein L3-like; Belongs to the universal ribosomal protein uL3 family. (389 aa)
LOC10795802960S ribosomal protein L35a-3-like. (112 aa)
LOC107959688Translation factor GUF1 homolog, chloroplastic; Promotes chloroplast protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. (681 aa)
LOC107959777GTP-binding protein TypA/BipA homolog isoform X1. (665 aa)
LOC107961757HBS1-like protein isoform X1. (679 aa)
LOC10796204360S ribosomal protein L35a-1-like. (112 aa)
LOC107962356H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (191 aa)
LOC107961760HBS1-like protein. (164 aa)
LOC107962309Elongation factor 2-like. (843 aa)
EF1A6Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (447 aa)
EF1A5Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (448 aa)
EF1A4Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (447 aa)
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.