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LOC107934197 LOC107934197 LOC107936898 LOC107936898 LOC107935951 LOC107935951 LOC107939181 LOC107939181 LOC107941828 LOC107941828 LOC107942133 LOC107942133 EF1A2 EF1A2 EF1A3 EF1A3 EF1A4 EF1A4 EF1A5 EF1A5 EF1A6 EF1A6 LOC107962752 LOC107962752 LOC107962309 LOC107962309 LOC107960221 LOC107960221 LOC107959285 LOC107959285 LOC107958519 LOC107958519 LOC107956262 LOC107956262 LOC107957148 LOC107957148 LOC107955350 LOC107955350 LOC107954729 LOC107954729 LOC107954596 LOC107954596 LOC107953215 LOC107953215 LOC107952018 LOC107952018 LOC107951657 LOC107951657 LOC107949645 LOC107949645 LOC107948434 LOC107948434 LOC107886021 LOC107886021 LOC107886208 LOC107886208 LOC107886217 LOC107886217 LOC107888510 LOC107888510 LOC107889155 LOC107889155 LOC107891174 LOC107891174 LOC107894924 LOC107894924 LOC107896223 LOC107896223 LOC107896850 LOC107896850 LOC107897119 LOC107897119 LOC107898885 LOC107898885 LOC107899443 LOC107899443 LOC107899669 LOC107899669 LOC107898300 LOC107898300 LOC107899670 LOC107899670 LOC107901256 LOC107901256 LOC107904509 LOC107904509 LOC107903762 LOC107903762 LOC107903816 LOC107903816 LOC107905285 LOC107905285 LOC107905230 LOC107905230 LOC107906311 LOC107906311 LOC107910424 LOC107910424 LOC107912934 LOC107912934 LOC107914125 LOC107914125 LOC107941193 LOC107941193 LOC107913416 LOC107913416 LOC107915200 LOC107915200 LOC107914501 LOC107914501 LOC107919778 LOC107919778 LOC107919552 LOC107919552 LOC107924010 LOC107924010 LOC107924124 LOC107924124 LOC107923402 LOC107923402 LOC107924550 LOC107924550 LOC107928364 LOC107928364 LOC107928401 LOC107928401 LOC107928553 LOC107928553 LOC107928436 LOC107928436 LOC107930346 LOC107930346 LOC107947068 LOC107947068 LOC107945197 LOC107945197 LOC107943300 LOC107943300 LOC107943065 LOC107943065 LOC107942552 LOC107942552 LOC107941819 LOC107941819 LOC107931305 LOC107931305 LOC107932666 LOC107932666 LOC107935050 LOC107935050
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107934197Elongation factor 1-alpha-like. (309 aa)
LOC107936898Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (454 aa)
LOC107935951Transcription elongation factor TFIIS-like isoform X2. (326 aa)
LOC107939181Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (88 aa)
LOC107941828Transcription elongation factor TFIIS-like. (366 aa)
LOC107942133Elongation factor G-like. (497 aa)
EF1A2Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (447 aa)
EF1A3Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (448 aa)
EF1A4Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (447 aa)
EF1A5Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (448 aa)
EF1A6Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (447 aa)
LOC107962752Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. (1083 aa)
LOC107962309Elongation factor 2-like. (843 aa)
LOC107960221Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (106 aa)
LOC107959285Elongation factor 1-beta 2-like isoform X1; Belongs to the EF-1-beta/EF-1-delta family. (219 aa)
LOC107958519Elongation factor P-like. (229 aa)
LOC107956262Putative transcription elongation factor SPT5 homolog 1. (198 aa)
LOC107957148Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (449 aa)
LOC107955350Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1603 aa)
LOC107954729Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. (392 aa)
LOC107954596Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (755 aa)
LOC107953215Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (447 aa)
LOC107952018Transcription elongation factor SPT5. (1039 aa)
LOC107951657Transcription elongation factor spt6-like. (302 aa)
LOC107949645Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (485 aa)
LOC107948434Elongation factor 2. (843 aa)
LOC107886021Transcription elongation factor B polypeptide 1-like isoform X1; Belongs to the SKP1 family. (98 aa)
LOC107886208Elongation factor 2-like. (843 aa)
LOC107886217Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (485 aa)
LOC107888510Transcription elongation factor B polypeptide 3-like. (237 aa)
LOC107889155Elongation factor 1-beta 2-like; Belongs to the EF-1-beta/EF-1-delta family. (222 aa)
LOC107891174Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (447 aa)
LOC107894924Transcription elongation factor SPT4 homolog 1-like isoform X1. (157 aa)
LOC107896223Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1584 aa)
LOC107896850Transcription elongation factor TFIIS-like. (364 aa)
LOC107897119Transcription elongation factor SPT5. (1042 aa)
LOC107898885Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family. (116 aa)
LOC107899443Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (449 aa)
LOC107899669Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (447 aa)
LOC107898300Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. (392 aa)
LOC107899670Elongation factor 1-alpha-like. (241 aa)
LOC107901256Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. (1081 aa)
LOC107904509Elongation factor G, chloroplastic; Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl- tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (783 aa)
LOC107903762Transcription elongation factor TFIIS-like. (330 aa)
LOC107903816Elongation factor 2-like. (843 aa)
LOC107905285Elongation factor 1-alpha-like isoform X1. (516 aa)
LOC107905230Transcription elongation factor SPT5. (1022 aa)
LOC107906311Elongation factor P-like. (229 aa)
LOC107910424Transcription elongation factor SPT5. (1038 aa)
LOC107912934Elongation factor 2-like. (843 aa)
LOC107914125Transcription elongation factor SPT5. (1050 aa)
LOC107941193Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (107 aa)
LOC107913416Elongation factor 1-delta-like; Belongs to the EF-1-beta/EF-1-delta family. (230 aa)
LOC107915200Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1566 aa)
LOC107914501Transcription elongation factor TFIIS-like. (364 aa)
LOC107919778Elongation factor 2. (843 aa)
LOC107919552Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family. (116 aa)
LOC107924010Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (753 aa)
LOC107924124Elongation factor G, chloroplastic; Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl- tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (783 aa)
LOC107923402Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1642 aa)
LOC107924550Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (448 aa)
LOC107928364Elongation factor 1-gamma-like. (421 aa)
LOC107928401Elongation factor 1-gamma-like. (421 aa)
LOC107928553Transcription elongation factor TFIIS-like. (366 aa)
LOC107928436Elongation factor P-like. (238 aa)
LOC107930346Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (453 aa)
LOC107947068Elongation factor-like GTPase 1. (1027 aa)
LOC107945197Elongation factor 1-gamma-like. (421 aa)
LOC107943300Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (106 aa)
LOC107943065Elongation factor 1-beta 2-like; Belongs to the EF-1-beta/EF-1-delta family. (222 aa)
LOC107942552Elongation factor 1-delta-like; Belongs to the EF-1-beta/EF-1-delta family. (230 aa)
LOC107941819Elongation factor P-like. (238 aa)
LOC107931305Transcription elongation factor B polypeptide 3-like. (237 aa)
LOC107932666Elongation factor 2-like. (843 aa)
LOC107935050Transcription elongation factor B polypeptide 1-like; Belongs to the SKP1 family. (98 aa)
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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