45 items (Gossypium hirsutum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107929722	Diphthine methyltransferase homolog. (186 aa)
	LOC107886109	Eukaryotic translation initiation factor 5A. (159 aa)
	LOC107886208	Elongation factor 2-like. (843 aa)
	LOC107887366	Eukaryotic translation initiation factor 5A. (159 aa)
	LOC107890838	2-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2. (491 aa)
	LOC107890893	Diphthine methyltransferase homolog. (346 aa)
	LOC107891127	Protein-S-isoprenylcysteine O-methyltransferase. (188 aa)
	LOC107894958	Uncharacterized protein LOC107894958. (223 aa)
	LOC107896253	Deoxyhypusine synthase-like. (362 aa)
	LOC107899059	Diphthamide biosynthesis protein 2-like isoform X1. (572 aa)
	LOC107898875	FAD synthetase 2, chloroplastic-like. (373 aa)
	LOC107903816	Elongation factor 2-like. (843 aa)
	LOC107906569	Uncharacterized protein LOC107906569. (392 aa)
	LOC107908609	2-(3-amino-3-carboxypropyl)histidine synthase subunit 1; Required for the first step of diphthamide biosynthesis, the transfer of 3-amino-3-carboxypropyl from S-adenosyl-L-methionine to a histidine residue. Diphthamide is a post-translational modification of histidine which occurs in elongation factor 2. (464 aa)
	LOC107910125	Eukaryotic translation initiation factor 5A. (159 aa)
	LOC107911946	Protein-ribulosamine 3-kinase, chloroplastic; Belongs to the fructosamine kinase family. (329 aa)
	LOC107912934	Elongation factor 2-like. (843 aa)
	LOC107912121	Eukaryotic translation initiation factor 5A. (159 aa)
	LOC107913618	Protein-S-isoprenylcysteine O-methyltransferase. (188 aa)
	LOC107915737	Deoxyhypusine synthase. (363 aa)
	LOC107915738	Deoxyhypusine synthase-like. (362 aa)
	LOC107919778	Elongation factor 2. (843 aa)
	LOC107918546	Eukaryotic translation initiation factor 5A. (159 aa)
	LOC107925677	Uncharacterized protein LOC107925677. (243 aa)
	LOC107928569	Diphthamide biosynthesis protein 3-like. (82 aa)
	LOC107928218	Uncharacterized protein LOC107928218. (243 aa)
	LOC107931206	Protein-S-isoprenylcysteine O-methyltransferase. (222 aa)
	LOC107931501	Eukaryotic translation initiation factor 5A. (159 aa)
	LOC107932666	Elongation factor 2-like. (843 aa)
	LOC107933602	Diphthine methyltransferase homolog. (346 aa)
	LOC107936746	Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family. (314 aa)
	LOC107938393	Probable diphthine methyl ester synthase isoform X1. (292 aa)
	LOC107942513	Eukaryotic translation initiation factor 5A. (129 aa)
	LOC107946091	Protein-S-isoprenylcysteine O-methyltransferase. (203 aa)
	LOC107947808	Diphthamide biosynthesis protein 2-like. (195 aa)
	LOC107948434	Elongation factor 2. (843 aa)
	LOC107949816	Eukaryotic translation initiation factor 5A. (159 aa)
	LOC107949010	FAD synthetase 2, chloroplastic-like. (373 aa)
	LOC107951259	Eukaryotic translation initiation factor 5A. (159 aa)
	LOC107953462	Eukaryotic translation initiation factor 5A. (159 aa)
	LOC107955448	Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family. (314 aa)
	LOC107956647	Uncharacterized protein LOC107956647. (222 aa)
	LOC107959130	Uncharacterized protein LOC107959130. (392 aa)
	LOC107959730	Uncharacterized protein LOC107891928. (130 aa)
	LOC107962309	Elongation factor 2-like. (843 aa)

Your Current Organism:

Gossypium hirsutum

NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC107886109	LOC107886208	A0A1U8HH65	A0A1U8HHJ9	Eukaryotic translation initiation factor 5A.	Elongation factor 2-like.	0.869
LOC107886109	LOC107896253	A0A1U8HH65	A0A1U8IKE9	Eukaryotic translation initiation factor 5A.	Deoxyhypusine synthase-like.	0.966
LOC107886109	LOC107903816	A0A1U8HH65	A0A1U8JB62	Eukaryotic translation initiation factor 5A.	Elongation factor 2-like.	0.869
LOC107886109	LOC107912934	A0A1U8HH65	A0A1U8K2R4	Eukaryotic translation initiation factor 5A.	Elongation factor 2-like.	0.869
LOC107886109	LOC107915737	A0A1U8HH65	A0A1U8KCZ9	Eukaryotic translation initiation factor 5A.	Deoxyhypusine synthase.	0.966
LOC107886109	LOC107915738	A0A1U8HH65	A0A1U8KHF2	Eukaryotic translation initiation factor 5A.	Deoxyhypusine synthase-like.	0.966
LOC107886109	LOC107919778	A0A1U8HH65	A0A1U8KQ88	Eukaryotic translation initiation factor 5A.	Elongation factor 2.	0.869
LOC107886109	LOC107932666	A0A1U8HH65	A0A1U8M065	Eukaryotic translation initiation factor 5A.	Elongation factor 2-like.	0.869
LOC107886109	LOC107936746	A0A1U8HH65	A0A1U8MDV0	Eukaryotic translation initiation factor 5A.	Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family.	0.961
LOC107886109	LOC107948434	A0A1U8HH65	A0A1U8NHQ6	Eukaryotic translation initiation factor 5A.	Elongation factor 2.	0.869
LOC107886109	LOC107955448	A0A1U8HH65	A0A1U8P685	Eukaryotic translation initiation factor 5A.	Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family.	0.961
LOC107886109	LOC107962309	A0A1U8HH65	A0A1U8PUU7	Eukaryotic translation initiation factor 5A.	Elongation factor 2-like.	0.869
LOC107886208	LOC107886109	A0A1U8HHJ9	A0A1U8HH65	Elongation factor 2-like.	Eukaryotic translation initiation factor 5A.	0.869
LOC107886208	LOC107887366	A0A1U8HHJ9	A0A1U8HLY4	Elongation factor 2-like.	Eukaryotic translation initiation factor 5A.	0.869
LOC107886208	LOC107890838	A0A1U8HHJ9	A0A1U8HY34	Elongation factor 2-like.	2-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2.	0.890
LOC107886208	LOC107890893	A0A1U8HHJ9	A0A1U8HYA3	Elongation factor 2-like.	Diphthine methyltransferase homolog.	0.754
LOC107886208	LOC107894958	A0A1U8HHJ9	A0A1U8IGX5	Elongation factor 2-like.	Uncharacterized protein LOC107894958.	0.767
LOC107886208	LOC107899059	A0A1U8HHJ9	A0A1U8IQ06	Elongation factor 2-like.	Diphthamide biosynthesis protein 2-like isoform X1.	0.890
LOC107886208	LOC107908609	A0A1U8HHJ9	A0A1U8JM08	Elongation factor 2-like.	2-(3-amino-3-carboxypropyl)histidine synthase subunit 1; Required for the first step of diphthamide biosynthesis, the transfer of 3-amino-3-carboxypropyl from S-adenosyl-L-methionine to a histidine residue. Diphthamide is a post-translational modification of histidine which occurs in elongation factor 2.	0.890
LOC107886208	LOC107910125	A0A1U8HHJ9	A0A1U8JSY2	Elongation factor 2-like.	Eukaryotic translation initiation factor 5A.	0.869

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