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LOC107946806 LOC107946806 LOC107947091 LOC107947091 LOC107947115 LOC107947115 LOC107947368 LOC107947368 LOC107886366 LOC107886366 LOC107887093 LOC107887093 LOC107887454 LOC107887454 LOC107888453 LOC107888453 LOC107889306 LOC107889306 LOC107889305 LOC107889305 LOC107888519 LOC107888519 LOC107890466 LOC107890466 LOC107891537 LOC107891537 LOC107890060 LOC107890060 LOC107892428 LOC107892428 LOC107892551 LOC107892551 LOC107892552 LOC107892552 LOC107893417 LOC107893417 LOC107893353 LOC107893353 LOC107894612 LOC107894612 LOC107897934 LOC107897934 LOC107898066 LOC107898066 LOC107899400 LOC107899400 LOC107898021 LOC107898021 LOC107898825 LOC107898825 LOC107902856 LOC107902856 LOC107902846 LOC107902846 LOC107902696 LOC107902696 LOC107903900 LOC107903900 LOC107905266 LOC107905266 LOC107905290 LOC107905290 LOC107905873 LOC107905873 LOC107906690 LOC107906690 LOC107907498 LOC107907498 LOC107908075 LOC107908075 LOC107906677 LOC107906677 LOC107908531 LOC107908531 LOC107907353 LOC107907353 LOC107909874 LOC107909874 LOC107910013 LOC107910013 LOC107909319 LOC107909319 LOC107910657 LOC107910657 LOC107910656 LOC107910656 LOC107911576 LOC107911576 LOC107912049 LOC107912049 LOC107912204 LOC107912204 LOC107912268 LOC107912268 LOC107912324 LOC107912324 LOC107913234 LOC107913234 LOC107913539 LOC107913539 LOC107914740 LOC107914740 LOC107913776 LOC107913776 LOC107916598 LOC107916598 LOC107916885 LOC107916885 LOC107918483 LOC107918483 LOC107917326 LOC107917326 LOC107918722 LOC107918722 LOC107920789 LOC107920789 LOC107920917 LOC107920917 LOC107921218 LOC107921218 LOC107921247 LOC107921247 LOC107920931 LOC107920931 LOC107923182 LOC107923182 LOC107923223 LOC107923223 LOC107923752 LOC107923752 LOC107922673 LOC107922673 LOC107922782 LOC107922782 LOC107924104 LOC107924104 LOC107922887 LOC107922887 LOC107923012 LOC107923012 LOC107923109 LOC107923109 LOC107923870 LOC107923870 LOC107924609 LOC107924609 LOC107924650 LOC107924650 LOC107925717 LOC107925717 LOC107925704 LOC107925704 LOC107928309 LOC107928309 LOC107927350 LOC107927350 LOC107927358 LOC107927358 LOC107928765 LOC107928765 LOC107929328 LOC107929328 LOC107929428 LOC107929428 LOC107929553 LOC107929553 LOC107929048 LOC107929048 LOC107932814 LOC107932814 LOC107935553 LOC107935553 LOC107935512 LOC107935512 LOC107936712 LOC107936712 LOC107935920 LOC107935920 LOC107937032 LOC107937032 LOC107937982 LOC107937982 LOC107938485 LOC107938485 LOC107938484 LOC107938484 LOC107940023 LOC107940023 LOC107938995 LOC107938995 LOC107940857 LOC107940857 LOC107942638 LOC107942638 LOC107943981 LOC107943981 LOC107945952 LOC107945952 LOC107949785 LOC107949785 LOC107950123 LOC107950123 LOC107950364 LOC107950364 LOC107951298 LOC107951298 LOC107951878 LOC107951878 LOC107952894 LOC107952894 LOC107954415 LOC107954415 LOC107954619 LOC107954619 LOC107955654 LOC107955654 LOC107955444 LOC107955444 LOC107957968 LOC107957968 LOC107959215 LOC107959215 LOC107958643 LOC107958643 LOC107959354 LOC107959354 LOC107959376 LOC107959376 LOC107959946 LOC107959946 LOC107960738 LOC107960738 LOC107962800 LOC107962800 NAC17 NAC17
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107946806Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (858 aa)
LOC107947091DNA primase; Belongs to the eukaryotic-type primase small subunit family. (452 aa)
LOC107947115DNA primase; Belongs to the eukaryotic-type primase small subunit family. (452 aa)
LOC107947368Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (861 aa)
LOC107886366Probable DNA primase large subunit. (452 aa)
LOC107887093Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (626 aa)
LOC107887454Origin of replication complex subunit 5-like. (533 aa)
LOC107888453DNA helicase; Belongs to the MCM family. (935 aa)
LOC107889306Putative F-box protein At1g67623. (181 aa)
LOC107889305Putative F-box protein At1g67623. (234 aa)
LOC107888519DNA helicase; Belongs to the MCM family. (935 aa)
LOC107890466DNA replication licensing factor MCM5-like isoform X1; Belongs to the MCM family. (291 aa)
LOC107891537NAC domain-containing protein 89-like. (371 aa)
LOC107890060NAC domain-containing protein 89-like. (479 aa)
LOC107892428DNA replication licensing factor MCM5-like. (315 aa)
LOC107892551Putative F-box protein At1g67623. (234 aa)
LOC107892552Putative F-box protein At1g67623. (234 aa)
LOC107893417DNA helicase; Belongs to the MCM family. (734 aa)
LOC107893353LOW QUALITY PROTEIN: replication protein A 70 kDa DNA-binding subunit A-like. (550 aa)
LOC107894612Origin of replication complex subunit 6-like. (325 aa)
LOC107897934DNA polymerase. (1531 aa)
LOC107898066Origin of replication complex subunit 2-like. (261 aa)
LOC107899400Origin of replication complex subunit 2-like. (149 aa)
LOC107898021DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (623 aa)
LOC107898825LOW QUALITY PROTEIN: origin of replication complex subunit 2-like. (364 aa)
LOC107902856NAC domain-containing protein 86-like isoform X1. (445 aa)
LOC107902846Uncharacterized protein LOC107902846. (514 aa)
LOC107902696Putative F-box protein At1g67623. (207 aa)
LOC107903900DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (623 aa)
LOC107905266Thylakoid membrane protein TERC, chloroplastic-like. (368 aa)
LOC107905290Probable DNA helicase MCM8 isoform X1; Belongs to the MCM family. (793 aa)
LOC107905873DNA helicase; Belongs to the MCM family. (758 aa)
LOC107906690DNA polymerase epsilon subunit 3-like. (169 aa)
LOC107907498DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (525 aa)
LOC107908075Origin of replication complex subunit 2-like. (112 aa)
LOC107906677NAC domain-containing protein 89. (410 aa)
LOC107908531DNA helicase; Belongs to the MCM family. (822 aa)
LOC107907353DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (525 aa)
LOC107909874DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (326 aa)
LOC107910013Probable DNA primase large subunit. (452 aa)
LOC107909319NAC domain-containing protein 62-like. (562 aa)
LOC107910657DNA replication licensing factor MCM2-like. (82 aa)
LOC107910656DNA helicase; Belongs to the MCM family. (840 aa)
LOC107911576Origin of replication complex subunit 5-like. (532 aa)
LOC107912049Putative F-box protein At1g67623. (284 aa)
LOC107912204Uncharacterized protein LOC107912204. (874 aa)
LOC107912268NAC domain-containing protein 86-like. (457 aa)
LOC107912324DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (718 aa)
LOC107913234DNA polymerase. (1531 aa)
LOC107913539DNA helicase; Belongs to the MCM family. (839 aa)
LOC107914740Uncharacterized protein LOC107914740 isoform X1. (274 aa)
LOC107913776DNA helicase; Belongs to the MCM family. (758 aa)
LOC107916598Chaperone protein dnaJ 6-like. (287 aa)
LOC107916885Protein MCM10 homolog isoform X1. (401 aa)
LOC107918483Probable serine/threonine-protein kinase cdc7 isoform X1. (947 aa)
LOC107917326Origin of replication complex subunit 6-like. (199 aa)
LOC107918722Origin of replication complex subunit 6-like isoform X1. (287 aa)
LOC107920789DNA helicase; Belongs to the MCM family. (839 aa)
LOC107920917Chaperone protein dnaJ 6-like. (287 aa)
LOC107921218Chaperone protein dnaJ 6. (280 aa)
LOC107921247Protein MCM10 homolog. (401 aa)
LOC107920931NAC domain-containing protein 62-like. (562 aa)
LOC107923182Origin of replication complex subunit 5-like. (525 aa)
LOC107923223Protein CUP-SHAPED COTYLEDON 3-like. (254 aa)
LOC107923752Protein BPS1, chloroplastic-like. (352 aa)
LOC107922673Origin of replication complex subunit 2-like. (99 aa)
LOC107922782CDT1-like protein a, chloroplastic. (609 aa)
LOC107924104CDT1-like protein a, chloroplastic. (647 aa)
LOC107922887NAC domain-containing protein 86-like. (451 aa)
LOC107923012Uncharacterized protein LOC107923012 isoform X1. (873 aa)
LOC107923109Protein CUP-SHAPED COTYLEDON 3-like. (254 aa)
LOC107923870Protein BPS1, chloroplastic-like. (347 aa)
LOC107924609F-box protein At2g35280-like. (246 aa)
LOC107924650DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (718 aa)
LOC107925717NAC domain-containing protein 83-like. (402 aa)
LOC107925704Cell division control protein 45 homolog. (595 aa)
LOC107928309Origin of replication complex subunit 6-like. (197 aa)
LOC107927350NAC domain-containing protein 21/22-like. (268 aa)
LOC107927358Uncharacterized protein LOC107927358. (720 aa)
LOC107928765Cell division control protein; Belongs to the CDC6/cdc18 family. (509 aa)
LOC107929328Probable serine/threonine-protein kinase cdc7 isoform X1. (948 aa)
LOC107929428Probable DNA helicase MCM9; Belongs to the MCM family. (374 aa)
LOC107929553NAC domain-containing protein 14-like isoform X1. (877 aa)
LOC107929048Probable DNA helicase MCM9 isoform X1; Belongs to the MCM family. (667 aa)
LOC107932814Origin of replication complex subunit 2-like. (99 aa)
LOC107935553Origin of replication complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication; Belongs to the ORC4 family. (421 aa)
LOC107935512Origin of replication complex subunit 4-like. (167 aa)
LOC107936712CDT1-like protein a, chloroplastic. (601 aa)
LOC107935920DNA helicase; Belongs to the MCM family. (758 aa)
LOC107937032NAC domain-containing protein 30-like. (486 aa)
LOC107937982DNA helicase; Belongs to the MCM family. (734 aa)
LOC107938485DNA replication licensing factor MCM6-like; Belongs to the MCM family. (484 aa)
LOC107938484DNA replication licensing factor MCM6-like. (270 aa)
LOC107940023Origin of replication complex subunit 3-like isoform X1. (724 aa)
LOC107938995Putative NAC domain-containing protein 94 isoform X1. (481 aa)
LOC107940857DNA replication licensing factor MCM5-like. (83 aa)
LOC107942638DNA helicase; Belongs to the MCM family. (790 aa)
LOC107943981DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (1324 aa)
LOC107945952Protein BPS1, chloroplastic-like. (352 aa)
LOC107949785Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (626 aa)
LOC107950123Protein NTM1-like 9 isoform X1. (635 aa)
LOC107950364Cell division control protein; Belongs to the CDC6/cdc18 family. (509 aa)
LOC107951298Protein NTM1-like 9 isoform X1. (635 aa)
LOC107951878Origin of replication complex subunit 3-like isoform X1. (724 aa)
LOC107952894Protein CUP-SHAPED COTYLEDON 3-like. (279 aa)
LOC107954415Uncharacterized protein LOC107954415 isoform X1. (181 aa)
LOC107954619Protein CUP-SHAPED COTYLEDON 3-like. (279 aa)
LOC107955654Origin of replication complex subunit 6-like. (163 aa)
LOC107955444CDT1-like protein a, chloroplastic. (601 aa)
LOC107957968Thylakoid membrane protein TERC, chloroplastic-like. (368 aa)
LOC107959215NAC domain-containing protein 40-like. (410 aa)
LOC107958643Protein CUP-SHAPED COTYLEDON 3-like. (293 aa)
LOC107959354DNA polymerase epsilon subunit 3-like. (211 aa)
LOC107959376DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2204 aa)
LOC107959946Origin of replication complex subunit 2-like isoform X1. (105 aa)
LOC107960738Putative F-box protein At1g67623. (150 aa)
LOC107962800Putative NAC domain-containing protein 94 isoform X1. (417 aa)
NAC17Protein CUP-SHAPED COTYLEDON 3-like. (293 aa)
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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