STRINGSTRING
ACT_GOSHI ACT_GOSHI ACT11 ACT11 ACT2 ACT2 rpl5 rpl5 LOC107886208 LOC107886208 LOC107903816 LOC107903816 LOC107912934 LOC107912934 LOC107919778 LOC107919778 LOC107932666 LOC107932666 LOC107932458 LOC107932458 LOC107948434 LOC107948434 LOC107962309 LOC107962309 rps2 rps2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACT_GOSHIActin; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells; Belongs to the actin family. (377 aa)
ACT11Actin-7. (377 aa)
ACT2Actin-7-like. (377 aa)
rpl5Ribosomal protein L5. (193 aa)
LOC107886208Elongation factor 2-like. (843 aa)
LOC107903816Elongation factor 2-like. (843 aa)
LOC107912934Elongation factor 2-like. (843 aa)
LOC107919778Elongation factor 2. (843 aa)
LOC107932666Elongation factor 2-like. (843 aa)
LOC107932458Actin. (377 aa)
LOC107948434Elongation factor 2. (843 aa)
LOC107962309Elongation factor 2-like. (843 aa)
rps230S ribosomal protein S2, chloroplastic. (236 aa)
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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