43 items (Gossypium hirsutum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ACT2	Actin-7-like. (377 aa)
	ACT11	Actin-7. (377 aa)
	ACT_GOSHI	Actin; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells; Belongs to the actin family. (377 aa)
	LOC107962309	Elongation factor 2-like. (843 aa)
	LOC107920416	Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (417 aa)
	LOC107948434	Elongation factor 2. (843 aa)
	LOC107886208	Elongation factor 2-like. (843 aa)
	LOC107886252	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (411 aa)
	LOC107889104	Phosphotransferase. (496 aa)
	LOC107888339	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (411 aa)
	LOC107892269	Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (468 aa)
	LOC107893309	Phosphotransferase. (498 aa)
	LOC107891712	Phosphotransferase. (496 aa)
	LOC107894580	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (411 aa)
	LOC107893548	Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (417 aa)
	LOC107897355	Phosphotransferase. (497 aa)
	LOC107897570	Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (489 aa)
	LOC107899137	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (411 aa)
	LOC107901166	Phosphotransferase. (471 aa)
	LOC107945170	Phosphotransferase. (505 aa)
	LOC107942756	Phosphotransferase. (350 aa)
	LOC107940701	Phosphotransferase. (495 aa)
	LOC107939887	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (347 aa)
	LOC107939469	Phosphotransferase. (504 aa)
	LOC107938100	Phosphotransferase. (495 aa)
	LOC107933490	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (411 aa)
	LOC107933829	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (411 aa)
	LOC107932458	Actin. (377 aa)
	LOC107932052	Phosphotransferase. (498 aa)
	LOC107932666	Elongation factor 2-like. (843 aa)
	LOC107902724	Phosphotransferase. (437 aa)
	LOC107903816	Elongation factor 2-like. (843 aa)
	LOC107905797	Phosphotransferase. (492 aa)
	LOC107911217	Phosphotransferase. (492 aa)
	LOC107912878	Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (411 aa)
	LOC107912934	Elongation factor 2-like. (843 aa)
	LOC107885926	Cytosolic isocitrate dehydrogenase [NADP]-like. (329 aa)
	LOC107914238	Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (489 aa)
	LOC107919778	Elongation factor 2. (843 aa)
	LOC107949690	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (411 aa)
	LOC107946695	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (411 aa)
	LOC107962718	Phosphotransferase. (498 aa)
	LOC107955097	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (376 aa)

Your Current Organism:

Gossypium hirsutum

NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACT11	LOC107886208	Q7XZJ2	A0A1U8HHJ9	Actin-7.	Elongation factor 2-like.	0.665
ACT11	LOC107903816	Q7XZJ2	A0A1U8JB62	Actin-7.	Elongation factor 2-like.	0.665
ACT11	LOC107912934	Q7XZJ2	A0A1U8K2R4	Actin-7.	Elongation factor 2-like.	0.665
ACT11	LOC107919778	Q7XZJ2	A0A1U8KQ88	Actin-7.	Elongation factor 2.	0.665
ACT11	LOC107932666	Q7XZJ2	A0A1U8M065	Actin-7.	Elongation factor 2-like.	0.665
ACT11	LOC107948434	Q7XZJ2	A0A1U8NHQ6	Actin-7.	Elongation factor 2.	0.665
ACT11	LOC107962309	Q7XZJ2	A0A1U8PUU7	Actin-7.	Elongation factor 2-like.	0.665
ACT2	LOC107886208	Q7XZK0	A0A1U8HHJ9	Actin-7-like.	Elongation factor 2-like.	0.665
ACT2	LOC107903816	Q7XZK0	A0A1U8JB62	Actin-7-like.	Elongation factor 2-like.	0.665
ACT2	LOC107912934	Q7XZK0	A0A1U8K2R4	Actin-7-like.	Elongation factor 2-like.	0.665
ACT2	LOC107919778	Q7XZK0	A0A1U8KQ88	Actin-7-like.	Elongation factor 2.	0.665
ACT2	LOC107932666	Q7XZK0	A0A1U8M065	Actin-7-like.	Elongation factor 2-like.	0.665
ACT2	LOC107948434	Q7XZK0	A0A1U8NHQ6	Actin-7-like.	Elongation factor 2.	0.665
ACT2	LOC107962309	Q7XZK0	A0A1U8PUU7	Actin-7-like.	Elongation factor 2-like.	0.665
ACT_GOSHI	LOC107886208	O81221	A0A1U8HHJ9	Actin; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells; Belongs to the actin family.	Elongation factor 2-like.	0.665
ACT_GOSHI	LOC107903816	O81221	A0A1U8JB62	Actin; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells; Belongs to the actin family.	Elongation factor 2-like.	0.665
ACT_GOSHI	LOC107912934	O81221	A0A1U8K2R4	Actin; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells; Belongs to the actin family.	Elongation factor 2-like.	0.665
ACT_GOSHI	LOC107919778	O81221	A0A1U8KQ88	Actin; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells; Belongs to the actin family.	Elongation factor 2.	0.665
ACT_GOSHI	LOC107932666	O81221	A0A1U8M065	Actin; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells; Belongs to the actin family.	Elongation factor 2-like.	0.665
ACT_GOSHI	LOC107948434	O81221	A0A1U8NHQ6	Actin; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells; Belongs to the actin family.	Elongation factor 2.	0.665

page 1 of 36

Server load: low (16%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About