STRINGSTRING
LOC107944963 LOC107944963 LOC107944640 LOC107944640 LOC107943415 LOC107943415 LOC107939622 LOC107939622 LOC107938221 LOC107938221 LOC107937172 LOC107937172 LOC107934821 LOC107934821 LOC107927759 LOC107927759 LOC107919880 LOC107919880 LOC107916272 LOC107916272 LOC107915817 LOC107915817 LOC107914126 LOC107914126 LOC107915293 LOC107915293 LOC107914891 LOC107914891 LOC107912380 LOC107912380 LOC107905303 LOC107905303 LOC107904849 LOC107904849 LOC107904452 LOC107904452 LOC107905961 LOC107905961 LOC107903828 LOC107903828 LOC107901087 LOC107901087 LOC107898808 LOC107898808 LOC107888301 LOC107888301 LOC107887875 LOC107887875 LOC107888447 LOC107888447 LOC107888463 LOC107888463 LOC107891138 LOC107891138 LOC107893266 LOC107893266 LOC107897115 LOC107897115 LOC107897935 LOC107897935 LOC107897711 LOC107897711 LOC107894059 LOC107894059 LOC107899351 LOC107899351 LOC107897842 LOC107897842 bHLH3 bHLH3 CHS4 CHS4 CHS5 CHS5 LOC107957492 LOC107957492 LOC107957957 LOC107957957 LOC107957085 LOC107957085 LOC107948312 LOC107948312 LOC107947805 LOC107947805
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107944963Phenylalanine ammonia-lyase. (620 aa)
LOC107944640Phenylalanine ammonia-lyase; Belongs to the PAL/histidase family. (423 aa)
LOC107943415Phenylalanine ammonia-lyase. (593 aa)
LOC107939622Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1123 aa)
LOC107938221Anthocyanidin reductase-like. (336 aa)
LOC107937172Phenylalanine ammonia-lyase. (710 aa)
LOC107934821Chalcone synthase 2-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (389 aa)
LOC107927759Chalcone synthase 1; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (389 aa)
LOC107919880Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (256 aa)
LOC107916272Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (231 aa)
LOC107915817Phenylalanine ammonia-lyase. (710 aa)
LOC107914126Chalcone synthase-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (393 aa)
LOC107915293Chalcone synthase-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (401 aa)
LOC107914891Chalcone synthase 1-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (389 aa)
LOC107912380Chalcone synthase 2-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (344 aa)
LOC107905303Phenylalanine ammonia-lyase. (721 aa)
LOC107904849Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (230 aa)
LOC107904452Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (250 aa)
LOC107905961Anthocyanidin reductase-like. (336 aa)
LOC107903828Transcription factor bHLH149-like. (199 aa)
LOC107901087Phenylalanine ammonia-lyase. (697 aa)
LOC107898808Phenylalanine ammonia-lyase. (718 aa)
LOC107888301Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1122 aa)
LOC107887875Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1123 aa)
LOC107888447Chalcone synthase-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (334 aa)
LOC107888463Chalcone synthase 2-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (394 aa)
LOC107891138Phenylalanine ammonia-lyase. (720 aa)
LOC107893266Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1122 aa)
LOC107897115Chalcone synthase-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (393 aa)
LOC107897935Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (231 aa)
LOC107897711Phenylalanine ammonia-lyase. (697 aa)
LOC107894059Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (256 aa)
LOC107899351Phenylalanine ammonia-lyase. (721 aa)
LOC107897842Chalcone synthase 1-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (389 aa)
bHLH3Transcription factor bHLH30-like. (332 aa)
CHS4Chalcone synthase 2-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (392 aa)
CHS5Chalcone synthase 1-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (389 aa)
LOC107957492Transcription repressor MYB6-like. (281 aa)
LOC107957957Dihydroflavonol-4-reductase-like. (355 aa)
LOC107957085Chalcone synthase 1-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (389 aa)
LOC107948312Phenylalanine ammonia-lyase. (721 aa)
LOC107947805Phenylalanine ammonia-lyase-like; Belongs to the PAL/histidase family. (704 aa)
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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