STRINGSTRING
LOC107932458 LOC107932458 LOC107939622 LOC107939622 LOC107951610 LOC107951610 LOC107899629 LOC107899629 ACT_GOSHI ACT_GOSHI GA20ox1 GA20ox1 ACT11 ACT11 ACT2 ACT2 LOC107910471 LOC107910471 LOC107914084 LOC107914084 LOC107888301 LOC107888301 LOC107887875 LOC107887875 LOC107893266 LOC107893266
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107932458Actin. (377 aa)
LOC107939622Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1123 aa)
LOC107951610Protein GIGANTEA-like isoform X1. (1155 aa)
LOC107899629Gibberellin 2-beta-dioxygenase 1-like; Belongs to the iron/ascorbate-dependent oxidoreductase family. (331 aa)
ACT_GOSHIActin; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells; Belongs to the actin family. (377 aa)
GA20ox1Gibberellin 20 oxidase 1-A-like; Belongs to the iron/ascorbate-dependent oxidoreductase family. (387 aa)
ACT11Actin-7. (377 aa)
ACT2Actin-7-like. (377 aa)
LOC107910471Protein GIGANTEA isoform X1. (1155 aa)
LOC107914084Protein GIGANTEA-like. (1168 aa)
LOC107888301Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1122 aa)
LOC107887875Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1123 aa)
LOC107893266Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1122 aa)
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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