STRINGSTRING
LOC107893266 LOC107893266 LOC107896595 LOC107896595 LOC107951610 LOC107951610 LOC107948245 LOC107948245 LOC107947338 LOC107947338 LOC107947218 LOC107947218 LOC107939622 LOC107939622 LOC107929513 LOC107929513 LOC107930241 LOC107930241 LOC107916208 LOC107916208 LOC107914084 LOC107914084 LOC107911823 LOC107911823 LOC107910471 LOC107910471 LOC107887875 LOC107887875 LOC107888301 LOC107888301 SOC1 SOC1 LOC107905111 LOC107905111 GA20ox1 GA20ox1 DET2 DET2 LOC107900827 LOC107900827 LOC107957756 LOC107957756 LOC107890807 LOC107890807
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107893266Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1122 aa)
LOC107896595Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1142 aa)
LOC107951610Protein GIGANTEA-like isoform X1. (1155 aa)
LOC107948245Starch synthase, chloroplastic/amyloplastic; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily. (551 aa)
LOC107947338Ethylene-responsive transcription factor ERF105-like. (223 aa)
LOC107947218Starch synthase, chloroplastic/amyloplastic; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily. (608 aa)
LOC107939622Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1123 aa)
LOC107929513Starch synthase, chloroplastic/amyloplastic; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily. (608 aa)
LOC107930241Starch synthase, chloroplastic/amyloplastic; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily. (608 aa)
LOC107916208Phytochrome B apoprotein. (1193 aa)
LOC107914084Protein GIGANTEA-like. (1168 aa)
LOC107911823Starch synthase, chloroplastic/amyloplastic; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily. (609 aa)
LOC107910471Protein GIGANTEA isoform X1. (1155 aa)
LOC107887875Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1123 aa)
LOC107888301Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1122 aa)
SOC1MADS-box protein SOC1-like isoform X1. (221 aa)
LOC107905111Cryptochrome-1-like isoform X1. (685 aa)
GA20ox1Gibberellin 20 oxidase 1-A-like; Belongs to the iron/ascorbate-dependent oxidoreductase family. (387 aa)
DET2Steroid 5-alpha-reductase DET2; Involved in a reduction step in the biosynthesis of the plant steroid, brassinolide. Promotes cotton fibers (seed trichomes) initiation and elongation; Belongs to the steroid 5-alpha reductase family. (258 aa)
LOC107900827Cryptochrome-1-like isoform X1. (673 aa)
LOC107957756Cryptochrome-1-like isoform X1. (685 aa)
LOC107890807Starch synthase, chloroplastic/amyloplastic; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily. (608 aa)
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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