STRINGSTRING
LOC107947805 LOC107947805 LOC107944640 LOC107944640 LOC107943415 LOC107943415 LOC107939622 LOC107939622 LOC107937172 LOC107937172 LOC107915817 LOC107915817 LOC107905303 LOC107905303 LOC107901087 LOC107901087 LOC107898808 LOC107898808 LOC107887875 LOC107887875 LOC107891138 LOC107891138 LOC107893266 LOC107893266 LOC107899351 LOC107899351 LOC107897711 LOC107897711 LOC107888301 LOC107888301 LOC107934870 LOC107934870 LOC107957957 LOC107957957 LOC107948312 LOC107948312 LOC107944963 LOC107944963 LOC107892994 LOC107892994 C4H1 C4H1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107947805Phenylalanine ammonia-lyase-like; Belongs to the PAL/histidase family. (704 aa)
LOC107944640Phenylalanine ammonia-lyase; Belongs to the PAL/histidase family. (423 aa)
LOC107943415Phenylalanine ammonia-lyase. (593 aa)
LOC107939622Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1123 aa)
LOC107937172Phenylalanine ammonia-lyase. (710 aa)
LOC107915817Phenylalanine ammonia-lyase. (710 aa)
LOC107905303Phenylalanine ammonia-lyase. (721 aa)
LOC107901087Phenylalanine ammonia-lyase. (697 aa)
LOC107898808Phenylalanine ammonia-lyase. (718 aa)
LOC107887875Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1123 aa)
LOC107891138Phenylalanine ammonia-lyase. (720 aa)
LOC107893266Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1122 aa)
LOC107899351Phenylalanine ammonia-lyase. (721 aa)
LOC107897711Phenylalanine ammonia-lyase. (697 aa)
LOC107888301Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1122 aa)
LOC107934870R2R3 MYB transcription factor. (309 aa)
LOC107957957Dihydroflavonol-4-reductase-like. (355 aa)
LOC107948312Phenylalanine ammonia-lyase. (721 aa)
LOC107944963Phenylalanine ammonia-lyase. (620 aa)
LOC107892994Transcription factor MYB113-like. (237 aa)
C4H1Trans-cinnamate 4-monooxygenase-like; Belongs to the cytochrome P450 family. (505 aa)
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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