STRINGSTRING
LOC107936142 LOC107936142 LOC107937702 LOC107937702 LOC107939622 LOC107939622 LOC107940205 LOC107940205 LOC107944259 LOC107944259 LOC107959059 LOC107959059 TM6 TM6 LOC107909849 LOC107909849 MYB1 MYB1 LOC107937734 LOC107937734 MPK9 MPK9 MPK13 MPK13 LOC107887211 LOC107887211 LOC107888301 LOC107888301 LOC107887875 LOC107887875 LOC107893266 LOC107893266 LOC107893328 LOC107893328 LOC107896648 LOC107896648 LOC107903465 LOC107903465 LOC107907128 LOC107907128 LOC107907145 LOC107907145 LOC107908522 LOC107908522 LOC107917812 LOC107917812 LOC107919728 LOC107919728 LOC107921993 LOC107921993 LOC107927195 LOC107927195 LOC107932068 LOC107932068 LOC107932206 LOC107932206 LOC107933195 LOC107933195 LOC107932761 LOC107932761 LOC107932848 LOC107932848
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107936142Phospholipase. (1110 aa)
LOC107937702Cytidine deaminase 1-like. (310 aa)
LOC107939622Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1123 aa)
LOC107940205Cytidine deaminase 1-like. (295 aa)
LOC107944259Lycopene epsilon cyclase, chloroplastic-like. (434 aa)
LOC107959059Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (376 aa)
TM6Floral homeotic protein PMADS 1-like isoform X1. (224 aa)
LOC107909849Agamous-like MADS-box protein AGL9 homolog. (243 aa)
MYB1Transcription repressor MYB6-like. (294 aa)
LOC107937734Lycopene epsilon cyclase, chloroplastic-like isoform X1. (535 aa)
MPK9Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (375 aa)
MPK13Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (376 aa)
LOC107887211Phospholipase. (1108 aa)
LOC107888301Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1122 aa)
LOC107887875Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1123 aa)
LOC107893266Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1122 aa)
LOC107893328Cytidine deaminase 1-like isoform X1. (312 aa)
LOC107896648Phospholipase. (1099 aa)
LOC107903465GDP-L-galactose phosphorylase 1-like. (445 aa)
LOC107907128Lycopene epsilon cyclase, chloroplastic-like. (535 aa)
LOC107907145Cytidine deaminase 1-like. (304 aa)
LOC107908522Phospholipase. (1090 aa)
LOC107917812GDP-L-galactose phosphorylase 1-like. (450 aa)
LOC107919728GDP-L-galactose phosphorylase 2-like. (442 aa)
LOC107921993GDP-L-galactose phosphorylase 1-like. (450 aa)
LOC107927195Phospholipase. (1108 aa)
LOC107932068Cytidine deaminase 1-like. (299 aa)
LOC107932206Lycopene epsilon cyclase, chloroplastic-like isoform X1. (532 aa)
LOC107933195Phospholipase. (1090 aa)
LOC107932761GDP-L-galactose phosphorylase 1-like. (445 aa)
LOC107932848Cytidine deaminase 1-like. (295 aa)
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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