STRINGSTRING
LOC107886106 LOC107886106 LOC107886408 LOC107886408 LOC107887192 LOC107887192 LOC107888301 LOC107888301 LOC107886883 LOC107886883 LOC107889731 LOC107889731 LOC107887875 LOC107887875 LOC107888447 LOC107888447 LOC107888463 LOC107888463 LOC107890857 LOC107890857 LOC107889101 LOC107889101 LOC107891010 LOC107891010 LOC107893266 LOC107893266 LOC107891717 LOC107891717 LOC107894056 LOC107894056 LOC107896595 LOC107896595 LOC107897115 LOC107897115 LOC107898818 LOC107898818 LOC107899416 LOC107899416 LOC107897842 LOC107897842 LOC107900800 LOC107900800 LOC107900827 LOC107900827 LOC107904227 LOC107904227 LOC107903633 LOC107903633 LOC107904548 LOC107904548 LOC107906126 LOC107906126 LOC107906184 LOC107906184 LOC107905111 LOC107905111 LOC107907349 LOC107907349 LOC107909021 LOC107909021 LOC107907495 LOC107907495 LOC107909196 LOC107909196 LOC107909782 LOC107909782 LOC107910471 LOC107910471 LOC107911854 LOC107911854 LOC107912274 LOC107912274 LOC107912380 LOC107912380 LOC107912198 LOC107912198 LOC107912282 LOC107912282 LOC107912232 LOC107912232 LOC107912628 LOC107912628 LOC107913276 LOC107913276 LOC107914891 LOC107914891 LOC107914084 LOC107914084 LOC107915293 LOC107915293 LOC107914126 LOC107914126 LOC107914335 LOC107914335 LOC107916208 LOC107916208 LOC107919516 LOC107919516 LOC107919855 LOC107919855 LOC107918113 LOC107918113 LOC107919962 LOC107919962 LOC107922146 LOC107922146 LOC107922999 LOC107922999 LOC107923114 LOC107923114 LOC107923949 LOC107923949 LOC107922980 LOC107922980 LOC107924358 LOC107924358 LOC107924438 LOC107924438 LOC107924485 LOC107924485 LOC107923391 LOC107923391 LOC107924707 LOC107924707 LOC107924805 LOC107924805 LOC107924934 LOC107924934 LOC107926267 LOC107926267 LOC107926305 LOC107926305 LOC107925578 LOC107925578 LOC107927759 LOC107927759 LOC107928282 LOC107928282 LOC107927212 LOC107927212 LOC107929100 LOC107929100 LOC107929691 LOC107929691 LOC107929929 LOC107929929 LOC107929466 LOC107929466 LOC107929930 LOC107929930 LOC107932568 LOC107932568 LOC107932569 LOC107932569 LOC107933739 LOC107933739 LOC107934821 LOC107934821 LOC107934074 LOC107934074 LOC107935346 LOC107935346 LOC107936243 LOC107936243 LOC107937447 LOC107937447 LOC107938086 LOC107938086 LOC107939622 LOC107939622 LOC107940541 LOC107940541 LOC107941769 LOC107941769 LOC107941899 LOC107941899 LOC107942277 LOC107942277 LOC107944105 LOC107944105 LOC107944141 LOC107944141 LOC107945581 LOC107945581 LOC107946295 LOC107946295 LOC107946703 LOC107946703 LOC107946100 LOC107946100 LOC107947084 LOC107947084 LOC107947190 LOC107947190 LOC107947107 LOC107947107 LOC107949814 LOC107949814 LOC107951610 LOC107951610 LOC107953017 LOC107953017 LOC107952433 LOC107952433 LOC107953872 LOC107953872 LOC107954397 LOC107954397 LOC107953871 LOC107953871 LOC107955422 LOC107955422 LOC107957085 LOC107957085 LOC107957106 LOC107957106 LOC107957756 LOC107957756 LOC107959066 LOC107959066 CHS5 CHS5 FTL FTL CHS4 CHS4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107886106Two-component response regulator-like APRR1. (552 aa)
LOC107886408Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (285 aa)
LOC107887192WD repeat-containing protein RUP2-like. (401 aa)
LOC107888301Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1122 aa)
LOC107886883Transcription factor TCP21-like. (258 aa)
LOC107889731Two-component response regulator-like APRR7 isoform X1. (795 aa)
LOC107887875Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1123 aa)
LOC107888447Chalcone synthase-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (334 aa)
LOC107888463Chalcone synthase 2-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (394 aa)
LOC107890857WD repeat-containing protein RUP2-like. (404 aa)
LOC107889101Protein EARLY FLOWERING 3-like. (701 aa)
LOC107891010Two-component response regulator-like APRR7. (787 aa)
LOC107893266Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1122 aa)
LOC107891717Protein EARLY FLOWERING 3-like. (692 aa)
LOC107894056Transcription factor TCP21-like. (255 aa)
LOC107896595Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1142 aa)
LOC107897115Chalcone synthase-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (393 aa)
LOC107898818Two-component response regulator-like APRR7. (747 aa)
LOC107899416Casein kinase II subunit alpha-like; Belongs to the protein kinase superfamily. (428 aa)
LOC107897842Chalcone synthase 1-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (389 aa)
LOC107900800Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (276 aa)
LOC107900827Cryptochrome-1-like isoform X1. (673 aa)
LOC107904227Two-component response regulator-like APRR5 isoform X1. (706 aa)
LOC107903633Adagio protein 3-like isoform X1. (632 aa)
LOC107904548Two-component response regulator-like APRR5. (634 aa)
LOC107906126Protein EARLY FLOWERING 3-like. (731 aa)
LOC107906184Two-component response regulator-like APRR3 isoform X1. (698 aa)
LOC107905111Cryptochrome-1-like isoform X1. (685 aa)
LOC107907349Adagio protein 1-like. (610 aa)
LOC107909021Transcription factor TCP21-like. (257 aa)
LOC107907495Adagio protein 1-like. (610 aa)
LOC107909196Transcription factor HY5. (169 aa)
LOC107909782Protein SUPPRESSOR OF PHYA-105 1-like isoform X1. (985 aa)
LOC107910471Protein GIGANTEA isoform X1. (1155 aa)
LOC107911854Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (289 aa)
LOC107912274Protein LHY-like isoform X1. (729 aa)
LOC107912380Chalcone synthase 2-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (344 aa)
LOC107912198Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (287 aa)
LOC107912282Two-component response regulator-like APRR5 isoform X1. (652 aa)
LOC107912232Uncharacterized protein LOC107912232. (558 aa)
LOC107912628E3 ubiquitin-protein ligase COP1-like. (723 aa)
LOC107913276Casein kinase II subunit alpha-like; Belongs to the protein kinase superfamily. (428 aa)
LOC107914891Chalcone synthase 1-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (389 aa)
LOC107914084Protein GIGANTEA-like. (1168 aa)
LOC107915293Chalcone synthase-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (401 aa)
LOC107914126Chalcone synthase-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (393 aa)
LOC107914335Casein kinase II subunit alpha isoform X1; Belongs to the protein kinase superfamily. (339 aa)
LOC107916208Phytochrome B apoprotein. (1193 aa)
LOC107919516Adagio protein 1. (605 aa)
LOC107919855Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (284 aa)
LOC107918113Adagio protein 3-like. (627 aa)
LOC107919962Transcription factor TCP21-like. (255 aa)
LOC107922146Adagio protein 3-like isoform X1. (629 aa)
LOC107922999Uncharacterized protein LOC107922999. (564 aa)
LOC107923114Protein LHY-like isoform X1. (764 aa)
LOC107923949Protein LHY-like isoform X1. (732 aa)
LOC107922980Two-component response regulator-like APRR5 isoform X1. (634 aa)
LOC107924358Protein SUPPRESSOR OF PHYA-105 1-like isoform X1. (987 aa)
LOC107924438Two-component response regulator-like APRR3 isoform X1. (654 aa)
LOC107924485E3 ubiquitin-protein ligase COP1-like. (674 aa)
LOC107923391Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (289 aa)
LOC107924707Casein kinase II subunit alpha-like; Belongs to the protein kinase superfamily. (200 aa)
LOC107924805Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (287 aa)
LOC107924934E3 ubiquitin-protein ligase COP1-like isoform X1. (678 aa)
LOC107926267Adagio protein 1-like. (610 aa)
LOC107926305Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (286 aa)
LOC107925578Casein kinase II subunit alpha-like isoform X1. (280 aa)
LOC107927759Chalcone synthase 1; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (389 aa)
LOC107928282Protein HEADING DATE 3A-like. (174 aa)
LOC107927212Transcription factor PIF3-like. (335 aa)
LOC107929100Cryptochrome-1-like isoform X1. (630 aa)
LOC107929691Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (276 aa)
LOC107929929Protein EARLY FLOWERING 3-like. (520 aa)
LOC107929466Two-component response regulator-like APRR5 isoform X1. (638 aa)
LOC107929930Protein EARLY FLOWERING 3-like. (702 aa)
LOC107932568Casein kinase II subunit alpha-like isoform X1; Belongs to the protein kinase superfamily. (425 aa)
LOC107932569Casein kinase II subunit alpha, chloroplastic-like isoform X1; Belongs to the protein kinase superfamily. (363 aa)
LOC107933739Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (285 aa)
LOC107934821Chalcone synthase 2-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (389 aa)
LOC107934074Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (278 aa)
LOC107935346E3 ubiquitin-protein ligase COP1-like. (677 aa)
LOC107936243Cryptochrome-1-like isoform X1. (651 aa)
LOC107937447Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (286 aa)
LOC107938086Two-component response regulator-like APRR5 isoform X1. (705 aa)
LOC107939622Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1123 aa)
LOC107940541Cryptochrome-1-like isoform X2. (651 aa)
LOC107941769Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (285 aa)
LOC107941899Casein kinase II subunit alpha-like; Belongs to the protein kinase superfamily. (333 aa)
LOC107942277Transcription factor TCP7-like. (243 aa)
LOC107944105Casein kinase II subunit alpha-like; Belongs to the protein kinase superfamily. (415 aa)
LOC107944141Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (284 aa)
LOC107945581Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (278 aa)
LOC107946295Adagio protein 3-like. (627 aa)
LOC107946703Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (275 aa)
LOC107946100Transcription factor TCP7-like. (243 aa)
LOC107947084Protein SPA1-RELATED 2-like isoform X1. (1054 aa)
LOC107947190Two-component response regulator-like APRR5 isoform X1. (636 aa)
LOC107947107Protein SPA1-RELATED 2-like. (1054 aa)
LOC107949814Two-component response regulator-like APRR1. (552 aa)
LOC107951610Protein GIGANTEA-like isoform X1. (1155 aa)
LOC107953017Transcription factor PIL1-like. (473 aa)
LOC107952433Protein EARLY FLOWERING 3-like. (421 aa)
LOC107953872Protein EARLY FLOWERING 3-like isoform X2. (705 aa)
LOC107954397Transcription factor PIL1-like. (473 aa)
LOC107953871Protein EARLY FLOWERING 3-like. (704 aa)
LOC107955422LOW QUALITY PROTEIN: transcription factor PIF3-like. (373 aa)
LOC107957085Chalcone synthase 1-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (389 aa)
LOC107957106Two-component response regulator-like PRR37 isoform X1. (752 aa)
LOC107957756Cryptochrome-1-like isoform X1. (685 aa)
LOC107959066Two-component response regulator-like APRR3 isoform X1. (697 aa)
CHS5Chalcone synthase 1-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (389 aa)
FTLFlowering locus T-like protein. (174 aa)
CHS4Chalcone synthase 2-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (392 aa)
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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