34 items (Theobroma cacao) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TCM_001036	Leucine-rich repeat protein kinase family protein isoform 3. (575 aa)
	TCM_005345	Cytidine/deoxycytidylate deaminase family protein. (445 aa)
	TCM_005369	Adenosine deaminases,RNA binding,RNA binding,adenosine deaminases, putative isoform 1. (426 aa)
	TCM_007680	Nucleotidylyl transferase superfamily protein isoform 1. (449 aa)
	TCM_008582	Amidohydrolase family protein, expressed isoform 1. (461 aa)
	TCM_011228	Purple acid phosphatase. (337 aa)
	TCM_007420	GTP cyclohydrolase II isoform 1. (561 aa)
	TCM_011231	Purple acid phosphatase. (337 aa)
	TCM_011900	tRNA arginine adenosine deaminase, putative isoform 1. (1317 aa)
	TCM_021097	Inosine-uridine preferring nucleoside hydrolase family protein isoform 1. (949 aa)
	TCM_021531	6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. (219 aa)
	TCM_021538	Uridine-ribohydrolase 2. (322 aa)
	TCM_021893	Uncharacterized protein isoform 2. (215 aa)
	TCM_021914	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein. (298 aa)
	TCM_024568	Cytidine/deoxycytidylate deaminase family protein, putative isoform 1. (420 aa)
	TCM_025184	Cytidine/deoxycytidylate deaminase family protein isoform 1. (630 aa)
	TCM_024914	Nudix hydrolase isoform 1. (290 aa)
	TCM_025079	Haloacid dehalogenase-like hydrolase superfamily protein. (382 aa)
	TCM_024920	Riboflavin synthase alpha chain, putative isoform 1. (279 aa)
	TCM_025349	Haloacid dehalogenase-like hydrolase superfamily protein isoform 1. (256 aa)
	TCM_026406	Cytidine/deoxycytidylate deaminase family protein isoform 1. (186 aa)
	TCM_026507	Inosine-uridine preferring nucleoside hydrolase family protein. (945 aa)
	TCM_034794	Calcineurin-like metallo-phosphoesterase superfamily protein isoform 1. (446 aa)
	TCM_045617	Hydrolase, putative. (126 aa)
	TCM_045619	Uncharacterized protein isoform 1. (150 aa)
	TCM_013027	Purple acid phosphatase. (332 aa)
	TCM_013063	Purple acid phosphatase. (337 aa)
	TCM_013393	D-cysteine desulfhydrase isoform 1. (425 aa)
	TCM_016251	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein. (382 aa)
	TCM_029985	Riboflavin kinase/FMN hydrolase. (378 aa)
	TCM_039450	Cytidine/deoxycytidylate deaminase family protein isoform 1. (202 aa)
	TCM_040657	Uncharacterized protein. (100 aa)
	TCM_041806	Haloacid dehalogenase-like hydrolase superfamily protein. (605 aa)
	TCM_041913	DHBP synthase RibB-like alpha/beta domain,GTP cyclohydrolase II. (595 aa)

Your Current Organism:

Theobroma cacao

NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TCM_001036	TCM_005345	A0A061DJ90	A0A061DV77	Leucine-rich repeat protein kinase family protein isoform 3.	Cytidine/deoxycytidylate deaminase family protein.	0.974
TCM_001036	TCM_007420	A0A061DJ90	A0A061E903	Leucine-rich repeat protein kinase family protein isoform 3.	GTP cyclohydrolase II isoform 1.	0.901
TCM_001036	TCM_008582	A0A061DJ90	A0A061E549	Leucine-rich repeat protein kinase family protein isoform 3.	Amidohydrolase family protein, expressed isoform 1.	0.527
TCM_001036	TCM_011900	A0A061DJ90	A0A061EC64	Leucine-rich repeat protein kinase family protein isoform 3.	tRNA arginine adenosine deaminase, putative isoform 1.	0.489
TCM_001036	TCM_013393	A0A061DJ90	A0A061FXG7	Leucine-rich repeat protein kinase family protein isoform 3.	D-cysteine desulfhydrase isoform 1.	0.527
TCM_001036	TCM_021531	A0A061DJ90	A0A061EQM8	Leucine-rich repeat protein kinase family protein isoform 3.	6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.	0.997
TCM_001036	TCM_024568	A0A061DJ90	A0A061EWL5	Leucine-rich repeat protein kinase family protein isoform 3.	Cytidine/deoxycytidylate deaminase family protein, putative isoform 1.	0.477
TCM_001036	TCM_024920	A0A061DJ90	A0A061EYJ8	Leucine-rich repeat protein kinase family protein isoform 3.	Riboflavin synthase alpha chain, putative isoform 1.	0.964
TCM_001036	TCM_025184	A0A061DJ90	A0A061EXK7	Leucine-rich repeat protein kinase family protein isoform 3.	Cytidine/deoxycytidylate deaminase family protein isoform 1.	0.973
TCM_001036	TCM_026406	A0A061DJ90	A0A061F1D0	Leucine-rich repeat protein kinase family protein isoform 3.	Cytidine/deoxycytidylate deaminase family protein isoform 1.	0.489
TCM_001036	TCM_029985	A0A061DJ90	A0A061GG62	Leucine-rich repeat protein kinase family protein isoform 3.	Riboflavin kinase/FMN hydrolase.	0.764
TCM_001036	TCM_039450	A0A061DJ90	A0A061GS83	Leucine-rich repeat protein kinase family protein isoform 3.	Cytidine/deoxycytidylate deaminase family protein isoform 1.	0.489
TCM_001036	TCM_041913	A0A061DJ90	A0A061GXJ8	Leucine-rich repeat protein kinase family protein isoform 3.	DHBP synthase RibB-like alpha/beta domain,GTP cyclohydrolase II.	0.902
TCM_001036	TCM_045617	A0A061DJ90	A0A061FT25	Leucine-rich repeat protein kinase family protein isoform 3.	Hydrolase, putative.	0.477
TCM_001036	TCM_045619	A0A061DJ90	A0A061FTV9	Leucine-rich repeat protein kinase family protein isoform 3.	Uncharacterized protein isoform 1.	0.477
TCM_005345	TCM_001036	A0A061DV77	A0A061DJ90	Cytidine/deoxycytidylate deaminase family protein.	Leucine-rich repeat protein kinase family protein isoform 3.	0.974
TCM_005345	TCM_007420	A0A061DV77	A0A061E903	Cytidine/deoxycytidylate deaminase family protein.	GTP cyclohydrolase II isoform 1.	0.974
TCM_005345	TCM_016251	A0A061DV77	A0A061G5R5	Cytidine/deoxycytidylate deaminase family protein.	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein.	0.900
TCM_005345	TCM_021531	A0A061DV77	A0A061EQM8	Cytidine/deoxycytidylate deaminase family protein.	6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.	0.736
TCM_005345	TCM_024568	A0A061DV77	A0A061EWL5	Cytidine/deoxycytidylate deaminase family protein.	Cytidine/deoxycytidylate deaminase family protein, putative isoform 1.	0.722