34 items (Theobroma cacao) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TCM_000561	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain. (237 aa)
	TCM_005273	Ribosomal L5P family protein. (266 aa)
	TCM_007208	Ribosomal protein S14p/S29e family protein. (56 aa)
	TCM_006587	Translation initiation factor 3 family protein, putative isoform 1. (560 aa)
	TCM_011338	Ribosomal protein L6 family; Belongs to the universal ribosomal protein uL6 family. (225 aa)
	TCM_017084	50S ribosomal protein L2, putative. (203 aa)
	TCM_017226	Ribosomal protein large subunit 27. (191 aa)
	TCM_021105	Ribosomal protein L33 family protein. (58 aa)
	TCM_020231	Ribosomal protein L6 family protein; Belongs to the universal ribosomal protein uL6 family. (102 aa)
	TCM_025037	Ribosomal protein 5A; Belongs to the universal ribosomal protein uS7 family. (210 aa)
	TCM_025752	Ribosomal protein L3 family protein isoform 1; Belongs to the universal ribosomal protein uL3 family. (286 aa)
	TCM_023088	Ribosomal protein L22p/L17e family protein; Belongs to the universal ribosomal protein uL22 family. (275 aa)
	TCM_030671	Ribosomal protein S10p/S20e family protein isoform 1. (253 aa)
	TCM_030791	Trigger factor, putative. (547 aa)
	TCM_034043	Ribosomal protein L27 family protein isoform 1. (147 aa)
	TCM_034084	50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family. (135 aa)
	TCM_035027	Ribosomal protein S13/S18 family; Belongs to the universal ribosomal protein uS13 family. (168 aa)
	TCM_035025	Ribosomal protein S13/S18 family, putative; Belongs to the universal ribosomal protein uS13 family. (156 aa)
	TCM_033971	Ribosomal protein S9 isoform 1; Belongs to the universal ribosomal protein uS9 family. (283 aa)
	TCM_042948	Ribosomal protein L23AB isoform 1; Belongs to the universal ribosomal protein uL23 family. (154 aa)
	TCM_022089	Ribosomal protein S12/S23 family protein isoform 1; Belongs to the universal ribosomal protein uS12 family. (142 aa)
	TCM_043864	Ribosomal protein L9/RNase H1 isoform 1. (252 aa)
	TCM_014485	Ribosomal protein L19 family protein isoform 1. (247 aa)
	TCM_014380	40S ribosomal protein S15. (262 aa)
	TCM_045397	Translation elongation factor EF1B/ribosomal protein S6 family protein isoform 1. (160 aa)
	TCM_014967	Ribosomal protein S10p/S20e family protein isoform 1. (122 aa)
	TCM_027603	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (125 aa)
	TCM_015878	Ribosomal protein L19 family protein. (242 aa)
	TCM_029221	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (313 aa)
	TCM_029868	Ribosomal protein L21. (257 aa)
	TCM_036821	Ribosomal L28 family, putative. (258 aa)
	TCM_037640	Ribosomal protein S16 family protein. (136 aa)
	TCM_038089	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. (100 aa)
	TCM_041586	Ribosomal protein L9 isoform 1. (192 aa)

Your Current Organism:

Theobroma cacao

NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TCM_000561	TCM_005273	A0A061DG52	A0A061DUW6	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain.	Ribosomal L5P family protein.	0.969
TCM_000561	TCM_006587	A0A061DG52	A0A061E5R4	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain.	Translation initiation factor 3 family protein, putative isoform 1.	0.747
TCM_000561	TCM_007208	A0A061DG52	A0A061E070	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain.	Ribosomal protein S14p/S29e family protein.	0.999
TCM_000561	TCM_011338	A0A061DG52	A0A061E9Z3	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain.	Ribosomal protein L6 family; Belongs to the universal ribosomal protein uL6 family.	0.955
TCM_000561	TCM_014380	A0A061DG52	A0A061FYR4	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain.	40S ribosomal protein S15.	0.945
TCM_000561	TCM_014485	A0A061DG52	A0A061FXM0	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain.	Ribosomal protein L19 family protein isoform 1.	0.993
TCM_000561	TCM_014967	A0A061DG52	A0A061G153	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain.	Ribosomal protein S10p/S20e family protein isoform 1.	0.993
TCM_000561	TCM_015878	A0A061DG52	A0A061GB18	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain.	Ribosomal protein L19 family protein.	0.993
TCM_000561	TCM_017084	A0A061DG52	A0A061ECK1	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain.	50S ribosomal protein L2, putative.	0.990
TCM_000561	TCM_017226	A0A061DG52	A0A061EDW6	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain.	Ribosomal protein large subunit 27.	0.993
TCM_000561	TCM_020231	A0A061DG52	A0A061ES89	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain.	Ribosomal protein L6 family protein; Belongs to the universal ribosomal protein uL6 family.	0.955
TCM_000561	TCM_021105	A0A061DG52	A0A061END7	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain.	Ribosomal protein L33 family protein.	0.965
TCM_000561	TCM_022089	A0A061DG52	A0A061FNR5	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain.	Ribosomal protein S12/S23 family protein isoform 1; Belongs to the universal ribosomal protein uS12 family.	0.998
TCM_000561	TCM_023088	A0A061DG52	A0A061F1Y1	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain.	Ribosomal protein L22p/L17e family protein; Belongs to the universal ribosomal protein uL22 family.	0.970
TCM_000561	TCM_025037	A0A061DG52	A0A061EZ19	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain.	Ribosomal protein 5A; Belongs to the universal ribosomal protein uS7 family.	0.999
TCM_000561	TCM_025752	A0A061DG52	A0A061F0F3	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain.	Ribosomal protein L3 family protein isoform 1; Belongs to the universal ribosomal protein uL3 family.	0.942
TCM_000561	TCM_027603	A0A061DG52	A0A061GAP9	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.994
TCM_000561	TCM_029221	A0A061DG52	A0A061GBW3	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain.	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	0.999
TCM_000561	TCM_029868	A0A061DG52	A0A061GGH6	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain.	Ribosomal protein L21.	0.994
TCM_000561	TCM_030671	A0A061DG52	A0A061F401	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain.	Ribosomal protein S10p/S20e family protein isoform 1.	0.993