(5 nodes) FATC domain, and Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay network (Theobroma cacao)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TCM_001534	Uncharacterized protein isoform 1. (395 aa)
	TCM_006288	Target of rapamycin; Belongs to the PI3/PI4-kinase family. (3831 aa)
	TCM_036536	Uncharacterized protein. (78 aa)
	TCM_014036	Disulfide bond formation protein B 2, putative. (130 aa)
	TCM_041589	Uncharacterized protein isoform 1. (1219 aa)

Your Current Organism:

Theobroma cacao

NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TCM_001534	TCM_006288	A0A061DJ65	A0A061DX19	Uncharacterized protein isoform 1.	Target of rapamycin; Belongs to the PI3/PI4-kinase family.	0.758
TCM_001534	TCM_014036	A0A061DJ65	A0A061FX82	Uncharacterized protein isoform 1.	Disulfide bond formation protein B 2, putative.	0.758
TCM_001534	TCM_041589	A0A061DJ65	A0A061GW57	Uncharacterized protein isoform 1.	Uncharacterized protein isoform 1.	0.997
TCM_006288	TCM_001534	A0A061DX19	A0A061DJ65	Target of rapamycin; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein isoform 1.	0.758
TCM_006288	TCM_036536	A0A061DX19	A0A061FJ69	Target of rapamycin; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.578
TCM_006288	TCM_041589	A0A061DX19	A0A061GW57	Target of rapamycin; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein isoform 1.	0.811
TCM_014036	TCM_001534	A0A061FX82	A0A061DJ65	Disulfide bond formation protein B 2, putative.	Uncharacterized protein isoform 1.	0.758
TCM_014036	TCM_036536	A0A061FX82	A0A061FJ69	Disulfide bond formation protein B 2, putative.	Uncharacterized protein.	0.578
TCM_014036	TCM_041589	A0A061FX82	A0A061GW57	Disulfide bond formation protein B 2, putative.	Uncharacterized protein isoform 1.	0.752
TCM_036536	TCM_006288	A0A061FJ69	A0A061DX19	Uncharacterized protein.	Target of rapamycin; Belongs to the PI3/PI4-kinase family.	0.578
TCM_036536	TCM_014036	A0A061FJ69	A0A061FX82	Uncharacterized protein.	Disulfide bond formation protein B 2, putative.	0.578
TCM_041589	TCM_001534	A0A061GW57	A0A061DJ65	Uncharacterized protein isoform 1.	Uncharacterized protein isoform 1.	0.997
TCM_041589	TCM_006288	A0A061GW57	A0A061DX19	Uncharacterized protein isoform 1.	Target of rapamycin; Belongs to the PI3/PI4-kinase family.	0.811
TCM_041589	TCM_014036	A0A061GW57	A0A061FX82	Uncharacterized protein isoform 1.	Disulfide bond formation protein B 2, putative.	0.752