STRINGSTRING
TCM_000603 TCM_000603 TCM_001026 TCM_001026 TCM_001652 TCM_001652 TCM_002114 TCM_002114 TCM_002115 TCM_002115 TCM_000667 TCM_000667 TCM_005611 TCM_005611 TCM_005786 TCM_005786 TCM_007096 TCM_007096 TCM_010235 TCM_010235 TCM_006895 TCM_006895 TCM_017922 TCM_017922 TCM_020973 TCM_020973 TCM_020550 TCM_020550 TCM_022079 TCM_022079 TCM_022364 TCM_022364 TCM_022844 TCM_022844 TCM_026449 TCM_026449 TCM_024996 TCM_024996 TCM_026258 TCM_026258 TCM_033836 TCM_033836 TCM_033795 TCM_033795 TCM_034273 TCM_034273 TCM_034910 TCM_034910 TCM_035855 TCM_035855 TCM_043331 TCM_043331 TCM_045431 TCM_045431 TCM_012025 TCM_012025 TCM_012331 TCM_012331 TCM_014544 TCM_014544 TCM_014910 TCM_014910 TCM_011957 TCM_011957 TCM_015251 TCM_015251 TCM_015617 TCM_015617 TCM_016200 TCM_016200 TCM_027415 TCM_027415 TCM_027418 TCM_027418 TCM_028616 TCM_028616 TCM_029584 TCM_029584 TCM_029076 TCM_029076 TCM_029104 TCM_029104 TCM_046750 TCM_046750 TCM_027417 TCM_027417 TCM_036897 TCM_036897 TCM_028922 TCM_028922 TCM_037053 TCM_037053 TCM_037320 TCM_037320 TCM_037319 TCM_037319 TCM_038150 TCM_038150 TCM_039086 TCM_039086 TCM_038403 TCM_038403 TCM_037083 TCM_037083 TCM_040506 TCM_040506 TCM_041372 TCM_041372 TCM_041365 TCM_041365 TCM_041300 TCM_041300 TCM_041933 TCM_041933 TCM_042001 TCM_042001
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TCM_000603ATP-dependent RNA helicase eIF4A isoform 3. (218 aa)
TCM_001026RRM domain-containing protein. (183 aa)
TCM_001652Uncharacterized protein isoform 1. (443 aa)
TCM_002114Cell differentiation, Rcd1-like protein, putative. (324 aa)
TCM_002115Uncharacterized protein isoform 1. (864 aa)
TCM_000667Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (659 aa)
TCM_005611Ccr4-not transcription complex, putative isoform 1. (2413 aa)
TCM_005786Eukaryotic translation initiation factor 4G, putative isoform 1. (1875 aa)
TCM_007096Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (645 aa)
TCM_010235RNA-processing. (175 aa)
TCM_006895Polynucleotidyl transferase, putative. (205 aa)
TCM_017922Uncharacterized protein. (269 aa)
TCM_020973Eukaryotic initiation factor 4E protein; Belongs to the eukaryotic initiation factor 4E family. (206 aa)
TCM_020550P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1. (477 aa)
TCM_022079RNA binding family protein, putative isoform 1. (1086 aa)
TCM_022364Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (637 aa)
TCM_022844Polynucleotidyl transferase. (285 aa)
TCM_026449Transcription regulator NOT2/NOT3/NOT5 family protein. (904 aa)
TCM_024996DNAse I-like superfamily protein isoform 1. (602 aa)
TCM_026258F-box associated ubiquitination effector family protein, putative. (410 aa)
TCM_033836Thioredoxin superfamily protein isoform 1. (216 aa)
TCM_033795Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (648 aa)
TCM_034273Winged-helix DNA-binding transcription factor family protein, putative. (550 aa)
TCM_034910Carbon catabolite repressor protein 4, putative isoform 1. (584 aa)
TCM_035855Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (644 aa)
TCM_043331Polynucleotidyl transferase, putative. (252 aa)
TCM_045431Poly(A) binding 8-like protein. (207 aa)
TCM_012025Ribonuclease III family protein, putative. (189 aa)
TCM_012331DNAse I-like superfamily protein, putative isoform 1. (473 aa)
TCM_014544MA3 domain-containing protein isoform 1. (715 aa)
TCM_014910Ccr4-not transcription complex, putative. (2253 aa)
TCM_011957RING/U-box superfamily protein, putative isoform 1. (346 aa)
TCM_015251Glutaminyl cyclase, putative isoform 1. (315 aa)
TCM_015617CTC-interacting domain 11 isoform 1. (349 aa)
TCM_016200P-loop containing nucleoside triphosphate hydrolases superfamily protein. (560 aa)
TCM_027415Polynucleotidyl transferase, ribonuclease H-like superfamily protein isoform 1. (274 aa)
TCM_027418Polynucleotidyl transferase, ribonuclease H-like superfamily protein isoform 1. (274 aa)
TCM_028616RRM domain-containing protein. (89 aa)
TCM_029584Eukaryotic translation initiation factor 4E-1 isoform 2; Belongs to the eukaryotic initiation factor 4E family. (234 aa)
TCM_029076Eukaryotic translation initiation factor 4A1 isoform 1; Belongs to the DEAD box helicase family. (413 aa)
TCM_029104CTC-interacting domain 3, putative isoform 2. (643 aa)
TCM_046750DNAse I-like superfamily protein. (406 aa)
TCM_027417CCR4-associated factor 1. (356 aa)
TCM_036897MIF4G domain-containing protein / MA3 domain-containing protein isoform 2. (822 aa)
TCM_028922Poly(A) binding protein 6, putative isoform 3. (625 aa)
TCM_037053DNAse I-like superfamily protein isoform 1. (326 aa)
TCM_037320Eukaryotic translation initiation factor 4A1; Belongs to the DEAD box helicase family. (413 aa)
TCM_037319Eukaryotic translation initiation factor 4A1; Belongs to the DEAD box helicase family. (412 aa)
TCM_038150Tetratricopeptide repeat-like superfamily protein. (851 aa)
TCM_039086MA3 domain-containing protein. (764 aa)
TCM_038403MIF4G domain-containing protein / MA3 domain-containing protein. (800 aa)
TCM_037083Polynucleotidyl transferase, ribonuclease H-like superfamily protein. (274 aa)
TCM_040506Cell differentiation, Rcd1-like protein isoform 4. (322 aa)
TCM_041372F-box and associated interaction domains-containing protein. (109 aa)
TCM_041365Uncharacterized protein. (208 aa)
TCM_041300Polynucleotidyl transferase, ribonuclease H-like superfamily protein. (280 aa)
TCM_041933NOT2 / NOT3 / NOT5 family isoform 1. (664 aa)
TCM_042001RNA binding family protein, putative isoform 1. (1045 aa)
Your Current Organism:
Theobroma cacao
NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa
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