STRINGSTRING
TCM_005373 TCM_005373 TCM_022706 TCM_022706 TCM_030550 TCM_030550 TCM_034462 TCM_034462 TCM_043141 TCM_043141
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TCM_005373RNAhelicase-like 8 isoform 1; Belongs to the DEAD box helicase family. (501 aa)
TCM_022706mRNA-decapping enzyme-like protein. (376 aa)
TCM_030550Transducin/WD40 repeat-like superfamily protein, putative isoform 1. (1390 aa)
TCM_034462NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family. (555 aa)
TCM_043141Decapping 2 isoform 1. (321 aa)
Your Current Organism:
Theobroma cacao
NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa
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