STRINGSTRING
TCM_002265 TCM_002265 TCM_031111 TCM_031111 TCM_014908 TCM_014908 TCM_028839 TCM_028839 TCM_015882 TCM_015882
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TCM_002265Metallo-hydrolase/oxidoreductase superfamily protein. (353 aa)
TCM_031111tRNAse Z1 isoform 1. (300 aa)
TCM_014908P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1. (541 aa)
TCM_028839tRNAse Z4 isoform 1. (967 aa)
TCM_015882Dynamin-like 120 kDa protein, putative isoform 1. (314 aa)
Your Current Organism:
Theobroma cacao
NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa
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