33 items (Theobroma cacao) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TCM_000813	CCCH-type zinc fingerfamily protein with RNA-binding domain. (495 aa)
	TCM_001446	Tetratricopeptide repeat (TPR)-like superfamily protein, putative. (167 aa)
	TCM_001356	Pre-mRNA-splicing factor isy-1. (301 aa)
	TCM_001641	ATPase E1. (172 aa)
	TCM_004356	Splicing factor Prp18 family protein isoform 1. (415 aa)
	TCM_006604	GCIP-interacting family protein isoform 1. (307 aa)
	TCM_017602	ARM repeat superfamily protein isoform 1. (558 aa)
	TCM_019842	Family of Uncharacterized protein function. (315 aa)
	TCM_020026	Chromatin protein family. (581 aa)
	TCM_020801	CwfJ-like family protein, putative isoform 1. (777 aa)
	TCM_017921	RCD one 1-like protein. (206 aa)
	TCM_021228	Pleiotropic regulatory locus 1. (486 aa)
	TCM_020891	Pre-mRNA splicing Prp18-interacting factor isoform 1. (536 aa)
	TCM_020986	MOS4-associated complex 3A. (523 aa)
	TCM_019804	CBF1-interacting co-repressor CIR isoform 1. (474 aa)
	TCM_022702	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (164 aa)
	TCM_025242	Aquarius. (1539 aa)
	TCM_030585	Cwf15 / Cwc15 cell cycle control family protein. (227 aa)
	TCM_031173	Transducin/WD40 repeat-like superfamily protein isoform 1. (432 aa)
	TCM_026195	Cell division cycle 5 isoform 1. (967 aa)
	TCM_032899	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform 1. (1279 aa)
	TCM_036535	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform 1. (1168 aa)
	TCM_044159	Uncharacterized protein isoform 1. (749 aa)
	TCM_045455	Crooked neck protein / cell cycle protein, putative. (387 aa)
	TCM_015872	G10 family protein. (145 aa)
	TCM_016407	Crooked neck protein / cell cycle protein, putative isoform 1. (701 aa)
	TCM_016677	Uncharacterized protein. (587 aa)
	TCM_027148	Modifier of snc1,4 isoform 1. (253 aa)
	TCM_029973	Tetratricopeptide repeat-like superfamily protein. (1041 aa)
	TCM_037256	Cwf21 domain-containing protein. (94 aa)
	TCM_041484	G10 family protein isoform 1. (145 aa)
	TCM_039496	Transducin/WD40 repeat-like superfamily protein. (627 aa)
	TCM_045682	CwfJ-like family protein, putative. (210 aa)

Your Current Organism:

Theobroma cacao

NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TCM_000813	TCM_001356	A0A061DHR1	A0A061DJ91	CCCH-type zinc fingerfamily protein with RNA-binding domain.	Pre-mRNA-splicing factor isy-1.	0.997
TCM_000813	TCM_001446	A0A061DHR1	A0A061DIX5	CCCH-type zinc fingerfamily protein with RNA-binding domain.	Tetratricopeptide repeat (TPR)-like superfamily protein, putative.	0.989
TCM_000813	TCM_001641	A0A061DHR1	A0A061DK54	CCCH-type zinc fingerfamily protein with RNA-binding domain.	ATPase E1.	0.832
TCM_000813	TCM_004356	A0A061DHR1	A0A061DXM4	CCCH-type zinc fingerfamily protein with RNA-binding domain.	Splicing factor Prp18 family protein isoform 1.	0.740
TCM_000813	TCM_006604	A0A061DHR1	A0A061DZ07	CCCH-type zinc fingerfamily protein with RNA-binding domain.	GCIP-interacting family protein isoform 1.	0.984
TCM_000813	TCM_015872	A0A061DHR1	A0A061G4X0	CCCH-type zinc fingerfamily protein with RNA-binding domain.	G10 family protein.	0.943
TCM_000813	TCM_016407	A0A061DHR1	A0A061G6A7	CCCH-type zinc fingerfamily protein with RNA-binding domain.	Crooked neck protein / cell cycle protein, putative isoform 1.	0.992
TCM_000813	TCM_016677	A0A061DHR1	A0A061G7E5	CCCH-type zinc fingerfamily protein with RNA-binding domain.	Uncharacterized protein.	0.943
TCM_000813	TCM_017602	A0A061DHR1	A0A061EDQ9	CCCH-type zinc fingerfamily protein with RNA-binding domain.	ARM repeat superfamily protein isoform 1.	0.645
TCM_000813	TCM_017921	A0A061DHR1	A0A061ELR9	CCCH-type zinc fingerfamily protein with RNA-binding domain.	RCD one 1-like protein.	0.832
TCM_000813	TCM_019804	A0A061DHR1	A0A061EQH5	CCCH-type zinc fingerfamily protein with RNA-binding domain.	CBF1-interacting co-repressor CIR isoform 1.	0.924
TCM_000813	TCM_019842	A0A061DHR1	A0A061EJS4	CCCH-type zinc fingerfamily protein with RNA-binding domain.	Family of Uncharacterized protein function.	0.974
TCM_000813	TCM_020026	A0A061DHR1	A0A061EKD7	CCCH-type zinc fingerfamily protein with RNA-binding domain.	Chromatin protein family.	0.997
TCM_000813	TCM_020801	A0A061DHR1	A0A061ELK0	CCCH-type zinc fingerfamily protein with RNA-binding domain.	CwfJ-like family protein, putative isoform 1.	0.809
TCM_000813	TCM_020891	A0A061DHR1	A0A061ENU2	CCCH-type zinc fingerfamily protein with RNA-binding domain.	Pre-mRNA splicing Prp18-interacting factor isoform 1.	0.897
TCM_000813	TCM_020986	A0A061DHR1	A0A061EPA9	CCCH-type zinc fingerfamily protein with RNA-binding domain.	MOS4-associated complex 3A.	0.988
TCM_000813	TCM_021228	A0A061DHR1	A0A061ENC6	CCCH-type zinc fingerfamily protein with RNA-binding domain.	Pleiotropic regulatory locus 1.	0.992
TCM_000813	TCM_022702	A0A061DHR1	A0A061EU53	CCCH-type zinc fingerfamily protein with RNA-binding domain.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.941
TCM_000813	TCM_025242	A0A061DHR1	A0A061EZK9	CCCH-type zinc fingerfamily protein with RNA-binding domain.	Aquarius.	0.989
TCM_000813	TCM_026195	A0A061DHR1	A0A061F8T9	CCCH-type zinc fingerfamily protein with RNA-binding domain.	Cell division cycle 5 isoform 1.	0.992