STRINGSTRING
TCM_020703 TCM_020703 TCM_019051 TCM_019051 TCM_021986 TCM_021986 TCM_022567 TCM_022567 TCM_024818 TCM_024818 TCM_034419 TCM_034419 TCM_043950 TCM_043950 TCM_016467 TCM_016467 TCM_038944 TCM_038944 TCM_041186 TCM_041186
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TCM_020703Uncharacterized protein. (726 aa)
TCM_019051SMAD/FHA domain-containing protein. (737 aa)
TCM_021986Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain, putative isoform 1. (828 aa)
TCM_022567Alpha/beta-Hydrolases superfamily protein. (379 aa)
TCM_024818Chaperone DnaJ-domain superfamily protein isoform 1. (347 aa)
TCM_034419Canopy isoform 1. (182 aa)
TCM_043950SMAD/FHA domain-containing-like protein isoform 1. (319 aa)
TCM_016467PHD finger protein-related isoform 1. (448 aa)
TCM_038944Nicotianamine synthase 4. (286 aa)
TCM_041186RING-H2 group F2A isoform 1. (388 aa)
Your Current Organism:
Theobroma cacao
NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa
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