STRINGSTRING
TCM_001702 TCM_001702 TCM_003208 TCM_003208 TCM_002794 TCM_002794 TCM_003388 TCM_003388 TCM_008034 TCM_008034 TCM_008620 TCM_008620 TCM_009605 TCM_009605 TCM_008913 TCM_008913 TCM_009274 TCM_009274 TCM_009817 TCM_009817 TCM_010955 TCM_010955 TCM_010396 TCM_010396 TCM_008503 TCM_008503 TCM_009073 TCM_009073 TCM_010145 TCM_010145 TCM_018051 TCM_018051 TCM_017838 TCM_017838 TCM_018531 TCM_018531 TCM_019247 TCM_019247 TCM_018791 TCM_018791 TCM_021512 TCM_021512 TCM_021998 TCM_021998 TCM_023737 TCM_023737 TCM_024918 TCM_024918 TCM_025829 TCM_025829 TCM_023509 TCM_023509 TCM_032795 TCM_032795 TCM_033600 TCM_033600 TCM_032543 TCM_032543 TCM_033009 TCM_033009 TCM_033451 TCM_033451 TCM_033423 TCM_033423 TCM_033714 TCM_033714 TCM_033634 TCM_033634 TCM_036100 TCM_036100 TCM_043539 TCM_043539 TCM_044982 TCM_044982 TCM_012814 TCM_012814 TCM_013205 TCM_013205 TCM_013224 TCM_013224 TCM_013447 TCM_013447 TCM_013057 TCM_013057 TCM_013099 TCM_013099 TCM_013118 TCM_013118 TCM_044215 TCM_044215 TCM_012618 TCM_012618 TCM_027802 TCM_027802 TCM_027503 TCM_027503 TCM_028107 TCM_028107 TCM_027768 TCM_027768 TCM_028784 TCM_028784 TCM_028461 TCM_028461 TCM_030492 TCM_030492 TCM_038655 TCM_038655 TCM_038545 TCM_038545 TCM_040236 TCM_040236 TCM_039121 TCM_039121 TCM_040115 TCM_040115 TCM_040521 TCM_040521 TCM_039897 TCM_039897 TCM_040652 TCM_040652 TCM_045859 TCM_045859
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TCM_001702DNA/RNA polymerases superfamily protein. (647 aa)
TCM_003208Retrotransposon protein. (324 aa)
TCM_002794Reverse transcriptase domain-containing protein. (509 aa)
TCM_003388F7F22.17, putative. (251 aa)
TCM_008034RNA-directed DNA polymerase. (329 aa)
TCM_008620Polyprotein, 77260-80472, putative. (83 aa)
TCM_009605Uncharacterized protein. (302 aa)
TCM_008913Uncharacterized protein. (86 aa)
TCM_009274Uncharacterized protein. (167 aa)
TCM_009817Uncharacterized protein. (992 aa)
TCM_010955RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H. (280 aa)
TCM_010396Polyprotein, putative. (99 aa)
TCM_008503CCHC-type integrase-like protein. (524 aa)
TCM_009073Integrase catalytic domain-containing protein. (421 aa)
TCM_010145CCHC-type integrase, putative. (228 aa)
TCM_018051Reverse transcriptase domain-containing protein. (481 aa)
TCM_017838Reverse transcriptase domain-containing protein. (394 aa)
TCM_018531Retroelement pol polyprotein-like, putative. (346 aa)
TCM_019247Integrase catalytic domain-containing protein. (544 aa)
TCM_018791Gag protease polyprotein. (689 aa)
TCM_021512Uncharacterized protein. (311 aa)
TCM_021998Integrase catalytic domain-containing protein. (982 aa)
TCM_023737Integrase catalytic domain-containing protein. (513 aa)
TCM_024918Uncharacterized protein. (174 aa)
TCM_025829Reverse transcriptase domain-containing protein. (406 aa)
TCM_023509Uncharacterized protein. (344 aa)
TCM_032795Retrotransposon protein, unclassified, expressed, putative. (241 aa)
TCM_033600Reverse transcriptase domain-containing protein. (129 aa)
TCM_032543Integrase catalytic domain-containing protein. (189 aa)
TCM_033009CCHC-type integrase, putative. (268 aa)
TCM_033451RT_RNaseH domain-containing protein. (465 aa)
TCM_033423Uncharacterized protein. (809 aa)
TCM_033714Uncharacterized protein. (593 aa)
TCM_033634Retrotransposon protein, putative. (254 aa)
TCM_036100Integrase catalytic domain-containing protein. (160 aa)
TCM_043539RT_RNaseH domain-containing protein. (327 aa)
TCM_044982Retrotransposon protein. (170 aa)
TCM_012814RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H, putative. (488 aa)
TCM_013205CCHC-type integrase, putative. (508 aa)
TCM_013224Uncharacterized protein. (412 aa)
TCM_013447Reverse transcriptase domain-containing protein. (276 aa)
TCM_013057DNA/RNA polymerases superfamily protein. (878 aa)
TCM_013099RT_RNaseH_2 domain-containing protein. (471 aa)
TCM_013118Uncharacterized protein. (144 aa)
TCM_044215Reverse transcriptase domain-containing protein. (166 aa)
TCM_012618RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H. (180 aa)
TCM_027802RT_RNaseH_2 domain-containing protein. (122 aa)
TCM_027503Reverse transcriptase domain-containing protein. (338 aa)
TCM_028107DNA/RNA polymerases superfamily protein. (679 aa)
TCM_027768Retrotransposon protein, Ty3-gypsy subclass, putative. (308 aa)
TCM_028784Uncharacterized protein. (333 aa)
TCM_028461Uncharacterized protein. (685 aa)
TCM_030492Integrase catalytic domain-containing protein. (467 aa)
TCM_038655CCHC-type integrase. (395 aa)
TCM_038545Reverse transcriptase domain-containing protein. (141 aa)
TCM_040236Uncharacterized protein. (342 aa)
TCM_039121DNA/RNA polymerases superfamily protein. (668 aa)
TCM_040115Integrase catalytic domain-containing protein. (363 aa)
TCM_040521Retrotransposon gag protein, putative. (166 aa)
TCM_039897CCHC-type integrase. (282 aa)
TCM_040652RT_RNaseH_2 domain-containing protein. (511 aa)
TCM_045859Retrotransposon protein, Ty3-gypsy subclass, putative. (460 aa)
Your Current Organism:
Theobroma cacao
NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa
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