STRINGSTRING
TCM_001137 TCM_001137 TCM_020446 TCM_020446 TCM_046796 TCM_046796 TCM_030537 TCM_030537 TCM_034860 TCM_034860 TCM_036275 TCM_036275 TCM_012012 TCM_012012 TCM_012909 TCM_012909 TCM_012907 TCM_012907 TCM_041401 TCM_041401
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TCM_001137Thioredoxin superfamily protein, putative. (267 aa)
TCM_020446Cytochrome c oxidase 10. (441 aa)
TCM_046796Electron transport SCO1/SenC family protein. (331 aa)
TCM_030537Cytochrome c oxidase 15. (457 aa)
TCM_034860Cytochrome C oxidase polypeptide vib, putative. (187 aa)
TCM_036275Cytochrome c-2; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (113 aa)
TCM_012012Hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein. (82 aa)
TCM_012909Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, putative. (194 aa)
TCM_012907SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family. (337 aa)
TCM_041401Cytochrome c oxidase assembly protein CtaG / Cox11 family isoform 3. (279 aa)
Your Current Organism:
Theobroma cacao
NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa
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