STRINGSTRING
TCM_000222 TCM_000222 TCM_000192 TCM_000192 TCM_000233 TCM_000233 TCM_000059 TCM_000059 TCM_046671 TCM_046671 TCM_000405 TCM_000405 TCM_000265 TCM_000265 TCM_000502 TCM_000502 TCM_000485 TCM_000485 TCM_000234 TCM_000234 TCM_000655 TCM_000655 TCM_000700 TCM_000700 TCM_001024 TCM_001024 TCM_001425 TCM_001425 TCM_001049 TCM_001049 TCM_001516 TCM_001516 TCM_001230 TCM_001230 TCM_002152 TCM_002152 TCM_000717 TCM_000717 TCM_004223 TCM_004223 TCM_000818 TCM_000818 TCM_002924 TCM_002924 TCM_003925 TCM_003925 TCM_001046 TCM_001046 TCM_004706 TCM_004706 TCM_004750 TCM_004750 TCM_001395 TCM_001395 TCM_001403 TCM_001403 TCM_004235 TCM_004235 TCM_001439 TCM_001439 TCM_004500 TCM_004500 TCM_004817 TCM_004817 TCM_004872 TCM_004872 TCM_005176 TCM_005176 TCM_005306 TCM_005306 TCM_005887 TCM_005887 TCM_003146 TCM_003146 TCM_006098 TCM_006098 TCM_046992 TCM_046992 TCM_006024 TCM_006024 TCM_006616 TCM_006616 TCM_006941 TCM_006941 TCM_007171 TCM_007171 TCM_006624 TCM_006624 TCM_007156 TCM_007156 TCM_005153 TCM_005153 TCM_007153 TCM_007153 TCM_007152 TCM_007152 TCM_007157 TCM_007157 TCM_007664 TCM_007664 TCM_007764 TCM_007764 TCM_007803 TCM_007803 TCM_007621 TCM_007621 TCM_006756 TCM_006756 TCM_006822 TCM_006822 TCM_007154 TCM_007154 TCM_007207 TCM_007207 TCM_011194 TCM_011194 TCM_011357 TCM_011357 TCM_011657 TCM_011657 TCM_016982 TCM_016982 TCM_017328 TCM_017328 TCM_010128 TCM_010128 TCM_018411 TCM_018411 TCM_017516 TCM_017516 TCM_017280 TCM_017280 TCM_017324 TCM_017324 TCM_017920 TCM_017920 TCM_017553 TCM_017553 TCM_011139 TCM_011139 TCM_011210 TCM_011210 TCM_019326 TCM_019326 TCM_020057 TCM_020057 TCM_020305 TCM_020305 TCM_020249 TCM_020249 TCM_020322 TCM_020322 TCM_017347 TCM_017347 TCM_020300 TCM_020300 TCM_020832 TCM_020832 TCM_021118 TCM_021118 TCM_021343 TCM_021343 TCM_021151 TCM_021151 TCM_021689 TCM_021689 TCM_021440 TCM_021440 TCM_021990 TCM_021990 TCM_021970 TCM_021970 TCM_021991 TCM_021991 TCM_022181 TCM_022181 TCM_022318 TCM_022318 TCM_020838 TCM_020838 TCM_020888 TCM_020888 TCM_023366 TCM_023366 TCM_023835 TCM_023835 TCM_021341 TCM_021341 TCM_025022 TCM_025022 TCM_024548 TCM_024548 TCM_025136 TCM_025136 TCM_025179 TCM_025179 TCM_025432 TCM_025432 TCM_025848 TCM_025848 TCM_022048 TCM_022048 TCM_025743 TCM_025743 TCM_026148 TCM_026148 TCM_026141 TCM_026141 TCM_030511 TCM_030511 TCM_030637 TCM_030637 TCM_030649 TCM_030649 TCM_025077 TCM_025077 TCM_031090 TCM_031090 TCM_031093 TCM_031093 TCM_031125 TCM_031125 TCM_026317 TCM_026317 TCM_033730 TCM_033730 TCM_033731 TCM_033731 TCM_034318 TCM_034318 TCM_034786 TCM_034786 TCM_034778 TCM_034778 TCM_035007 TCM_035007 TCM_035037 TCM_035037 TCM_035043 TCM_035043 TCM_035094 TCM_035094 TCM_035039 TCM_035039 TCM_035038 TCM_035038 TCM_035320 TCM_035320 TCM_035633 TCM_035633 TCM_035213 TCM_035213 TCM_042708 TCM_042708 TCM_034498 TCM_034498 TCM_042813 TCM_042813 TCM_042565 TCM_042565 TCM_034859 TCM_034859 TCM_043322 TCM_043322 TCM_043101 TCM_043101 TCM_042822 TCM_042822 TCM_043022 TCM_043022 TCM_043183 TCM_043183 TCM_043753 TCM_043753 TCM_035680 TCM_035680 TCM_036301 TCM_036301 TCM_042342 TCM_042342 TCM_045603 TCM_045603 TCM_012263 TCM_012263 TCM_012179 TCM_012179 TCM_044422 TCM_044422 TCM_014693 TCM_014693 TCM_014633 TCM_014633 TCM_015453 TCM_015453 TCM_015395 TCM_015395 TCM_015891 TCM_015891 TCM_016211 TCM_016211 TCM_026888 TCM_026888 TCM_014839 TCM_014839 TCM_016601 TCM_016601 TCM_027110 TCM_027110 TCM_028426 TCM_028426 TCM_046839 TCM_046839 TCM_029035 TCM_029035 TCM_030078 TCM_030078 TCM_029940 TCM_029940 TCM_030300 TCM_030300 TCM_027588 TCM_027588 TCM_036924 TCM_036924 TCM_036978 TCM_036978 TCM_037353 TCM_037353 TCM_037641 TCM_037641 TCM_037580 TCM_037580 TCM_038119 TCM_038119 TCM_037984 TCM_037984 TCM_038063 TCM_038063 TCM_039448 TCM_039448 TCM_037278 TCM_037278 TCM_040842 TCM_040842 TCM_001027 TCM_001027 TCM_040553 TCM_040553 TCM_040751 TCM_040751 TCM_037714 TCM_037714 TCM_041266 TCM_041266 TCM_041451 TCM_041451 TCM_041482 TCM_041482 TCM_041508 TCM_041508 TCM_041353 TCM_041353 TCM_041563 TCM_041563 TCM_041584 TCM_041584 TCM_041526 TCM_041526 TCM_041643 TCM_041643 TCM_041881 TCM_041881 TCM_041887 TCM_041887 TCM_041961 TCM_041961 TCM_041890 TCM_041890 TCM_041900 TCM_041900 TCM_042089 TCM_042089 TCM_042228 TCM_042228 TCM_040456 TCM_040456 TCM_040556 TCM_040556 TCM_041564 TCM_041564
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TCM_000222Uncharacterized protein isoform 1. (344 aa)
TCM_000192S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. (307 aa)
TCM_000233Histone H1-3. (195 aa)
TCM_000059Uncharacterized protein isoform 1. (383 aa)
TCM_046671YEATS family protein isoform 1. (273 aa)
TCM_000405Chromatin remodeling 1 isoform 1. (754 aa)
TCM_000265Forkhead-associated domain-containing protein, putative isoform 1. (777 aa)
TCM_000502Tetratricopeptide repeat-like superfamily protein. (491 aa)
TCM_000485Nucleic acid binding,sequence-specific DNA binding transcription factors,zinc ion binding isoform 1. (1534 aa)
TCM_000234Histone H3; Belongs to the histone H3 family. (136 aa)
TCM_000655SET domain-containing protein isoform 4. (1037 aa)
TCM_000700MRG family protein isoform 2. (332 aa)
TCM_001024Histone superfamily protein isoform 1. (170 aa)
TCM_001425Trithorax-related protein 5 isoform 1. (381 aa)
TCM_001049Myosin heavy chain-related protein, putative. (620 aa)
TCM_001516Histone deacetylase 14 isoform 1. (509 aa)
TCM_001230Myosin-H heavy chain isoform 1. (348 aa)
TCM_002152PHD finger family protein / bromo-adjacent (BAH) domain-containing protein isoform 1. (216 aa)
TCM_000717WD-40 repeat family protein isoform 1. (599 aa)
TCM_004223Histone acetyltransferase. (562 aa)
TCM_000818RuvB-like helicase; Belongs to the RuvB family. (467 aa)
TCM_002924Helicase/SANT-associated, putative isoform 1. (2082 aa)
TCM_003925Set domain protein, putative isoform 1. (876 aa)
TCM_001046Histone H3; Belongs to the histone H3 family. (136 aa)
TCM_004706Uncharacterized protein. (557 aa)
TCM_004750Histone H1, putative. (194 aa)
TCM_001395Tetratricopeptide repeat-containing protein, putative isoform 1. (1294 aa)
TCM_001403Tetratricopeptide repeat (TPR)-containing-like protein. (358 aa)
TCM_004235Histone H2A; Belongs to the histone H2A family. (138 aa)
TCM_001439Transducin/WD40 repeat-like superfamily protein isoform 1. (495 aa)
TCM_004500Histone H2A; Belongs to the histone H2A family. (143 aa)
TCM_004817Enhancer of zeste, ezh, putative isoform 1. (885 aa)
TCM_004872Myb-like transcription factor family protein isoform 1. (450 aa)
TCM_005176Histone superfamily protein, putative isoform 1. (162 aa)
TCM_005306Chromatin remodeling complex subunit. (2267 aa)
TCM_005887F-box/WD repeat-containing protein 4. (76 aa)
TCM_003146DDT domain-containing protein, putative isoform 2. (736 aa)
TCM_006098Zinc ion binding,DNA binding, putative isoform 3. (770 aa)
TCM_046992SNF2 domain-containing protein / helicase domain-containing protein. (867 aa)
TCM_006024Chromatin remodeling complex subunit. (2342 aa)
TCM_006616Uncharacterized protein. (157 aa)
TCM_006941Uncharacterized protein isoform 1. (461 aa)
TCM_007171Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain, putative isoform 1. (950 aa)
TCM_006624Transducin family protein / WD-40 repeat family protein. (408 aa)
TCM_007156Plant basic secretory protein (BSP) family protein. (226 aa)
TCM_005153SET domain protein 14, putative isoform 1; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (1029 aa)
TCM_007153Plant basic secretory protein (BSP) family protein. (226 aa)
TCM_007152Plant basic secretory protein (BSP) family protein, putative. (225 aa)
TCM_007157Plant basic secretory protein (BSP) family protein. (280 aa)
TCM_007664Helicase-like transcription factor CHR28. (1117 aa)
TCM_007764Histone-lysine N-methyltransferase ATXR2 isoform 1. (482 aa)
TCM_007803SET domain protein 2 isoform 1. (2483 aa)
TCM_007621Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (499 aa)
TCM_006756YEATS family protein isoform 1. (299 aa)
TCM_006822PHD finger family protein / bromo-adjacent domain-containing protein isoform 2. (249 aa)
TCM_007154Plant basic secretory protein (BSP) family protein, putative. (234 aa)
TCM_007207Regulator of Vps4 activity in the MVB pathway protein. (162 aa)
TCM_011194Uncharacterized protein. (362 aa)
TCM_011357ARM repeat superfamily protein isoform 2. (1023 aa)
TCM_011657Arabinanase/levansucrase/invertase, putative. (482 aa)
TCM_016982Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. (286 aa)
TCM_017328HDAC_interact domain-containing protein. (326 aa)
TCM_010128WRKY domain class transcription factor. (1446 aa)
TCM_018411Prokaryotic-type, putative isoform 1. (423 aa)
TCM_017516DNA glycosylase superfamily protein, putative isoform 1. (382 aa)
TCM_017280HDAC_interact domain-containing protein. (369 aa)
TCM_017324HDAC_interact domain-containing protein. (369 aa)
TCM_017920SIN3-like 2, putative isoform 2. (1391 aa)
TCM_017553SET domain group 40, putative isoform 1. (498 aa)
TCM_011139SNF2 domain-containing protein / helicase domain-containing protein isoform 3. (737 aa)
TCM_011210C2H2-like zinc finger protein. (421 aa)
TCM_019326Histone chaperone ASF1A. (191 aa)
TCM_020057Trithorax-like protein 2 isoform 1. (1351 aa)
TCM_020305HMG (High mobility group) box with ARID/BRIGHT DNA-binding domain-like protein. (337 aa)
TCM_020249DNA-directed RNA polymerase subunit beta. (463 aa)
TCM_020322HMG box protein with ARID/BRIGHT DNA-binding domain isoform 1. (469 aa)
TCM_017347SET domain protein. (710 aa)
TCM_020300HMG (High mobility group) box with ARID/BRIGHT DNA-binding domain-like protein. (450 aa)
TCM_020832Helicase protein with RING/U-box domain. (1125 aa)
TCM_021118P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1. (3678 aa)
TCM_021343ASH1-related protein 2, putative isoform 1. (392 aa)
TCM_021151Chromatin-remodeling protein 11 isoform 1. (1063 aa)
TCM_021689Alfin-like 1. (239 aa)
TCM_021440Craniofacial development protein 1 isoform 1. (394 aa)
TCM_021990Histone H2A; Belongs to the histone H2A family. (153 aa)
TCM_021970Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
TCM_021991Histone H2B; Belongs to the histone H2B family. (139 aa)
TCM_022181Chromatin remodeling complex subunit-like protein isoform 1. (1961 aa)
TCM_022318Tudor/PWWP/MBT superfamily protein, putative isoform 1. (326 aa)
TCM_020838Actin-related protein 9; Belongs to the actin family. (592 aa)
TCM_020888Uncharacterized protein. (228 aa)
TCM_023366Chromatin assembly factor 1 subunit A, putative. (836 aa)
TCM_023835DNA/RNA helicase protein. (906 aa)
TCM_021341WD40/YVTN repeat-like-containing domain,Bromodomain isoform 1. (1738 aa)
TCM_025022SET domain protein 38 isoform 2. (333 aa)
TCM_024548Chromatin remodeling complex subunit isoform 1. (1536 aa)
TCM_025136Chromatin remodeling factor18 isoform 2. (735 aa)
TCM_025179Uncharacterized protein isoform 1. (226 aa)
TCM_025432Zinc ion binding,DNA binding, putative isoform 1. (584 aa)
TCM_025848Histone-lysine N-methyltransferase SUVR33-9-related protein 3 isoform 1. (377 aa)
TCM_022048Nfrkb-like protein. (694 aa)
TCM_025743Chromodomain protein, putative isoform 2. (435 aa)
TCM_026148Set domain protein, putative. (483 aa)
TCM_026141Chromatin remodeling complex subunit isoform 1. (1521 aa)
TCM_030511High mobility group family. (310 aa)
TCM_030637NAD-dependent deacetylase sirtuin-6. (552 aa)
TCM_030649DEK domain-containing chromatin associated protein isoform 1. (615 aa)
TCM_025077SNF2 domain-containing protein / helicase domain-containing protein isoform 1. (2043 aa)
TCM_031090Uncharacterized protein. (67 aa)
TCM_031093Transducin/WD40 repeat-like superfamily protein isoform 1. (370 aa)
TCM_031125Histone H2A; Belongs to the histone H2A family. (134 aa)
TCM_026317Ankyrin repeat family protein. (460 aa)
TCM_033730Uncharacterized protein isoform 1. (85 aa)
TCM_033731Histone-lysine N-methyltransferase ATX2. (258 aa)
TCM_034318High mobility group family isoform 1. (336 aa)
TCM_034786Set domain protein, putative isoform 1. (1241 aa)
TCM_034778MRG family protein, putative isoform 1. (337 aa)
TCM_035007Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (444 aa)
TCM_035037MYND-type domain-containing protein. (114 aa)
TCM_035043Histone-lysine N-methyltransferase ASHR1. (485 aa)
TCM_035094Uncharacterized protein isoform 1. (674 aa)
TCM_035039Histone-lysine N-methyltransferase ASHR1. (330 aa)
TCM_035038Histone-lysine N-methyltransferase ASHR1. (357 aa)
TCM_035320RING/FYVE/PHD zinc finger superfamily protein, putative. (696 aa)
TCM_035633SET domain protein, putative isoform 1. (658 aa)
TCM_035213Histone-lysine N-methyltransferase ASHH2. (2265 aa)
TCM_042708Actin-related protein 5; Belongs to the actin family. (725 aa)
TCM_034498Uncharacterized protein isoform 1. (625 aa)
TCM_042813ACT domain-containing protein. (495 aa)
TCM_042565Ethylene-dependent gravitropism-deficient and yellow-green-like 2 isoform 1. (526 aa)
TCM_034859Histone H3; Belongs to the histone H3 family. (136 aa)
TCM_043322ACT-like superfamily protein isoform 1. (413 aa)
TCM_043101Duplicated homeodomain-like superfamily protein isoform 2. (1384 aa)
TCM_042822Zinc knuckle family protein isoform 2. (241 aa)
TCM_043022Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (107 aa)
TCM_043183Zinc finger family protein / transcription factor jumonji family protein, putative. (1580 aa)
TCM_043753Enhancer of polycomb-like protein. (784 aa)
TCM_035680SET domain protein isoform 1. (490 aa)
TCM_036301Chromatin remodeling 31, putative. (1003 aa)
TCM_042342Transducin/WD40 repeat-like superfamily protein. (424 aa)
TCM_045603Tetratricopeptide repeat (TPR)-like superfamily protein, putative. (132 aa)
TCM_012263Histone deacetylase 15 isoform 1. (580 aa)
TCM_012179Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (470 aa)
TCM_044422Transducin/WD40 repeat-like superfamily protein. (552 aa)
TCM_014693DEK domain-containing chromatin associated protein, putative isoform 3. (589 aa)
TCM_014633Far1-related sequence 3 isoform 1. (186 aa)
TCM_015453Histone-lysine N-methyltransferase ATXR6. (356 aa)
TCM_015395SET domain protein 16 isoform 1; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (1090 aa)
TCM_015891Polycomb protein embryonic flower, putative isoform 1. (426 aa)
TCM_016211Uncharacterized protein. (1028 aa)
TCM_026888Histone-lysine N-methyltransferase ASHH3 isoform 1; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily. (512 aa)
TCM_014839VEFS-Box of polycomb protein isoform 1. (626 aa)
TCM_016601Alpha/beta-Hydrolases superfamily protein isoform 1. (382 aa)
TCM_027110Sequence-specific DNA binding transcription factors,DNA binding,DNA binding isoform 1. (358 aa)
TCM_028426Histone H2A; Belongs to the histone H2A family. (134 aa)
TCM_046839Nucleosome assembly protein 1,2, putative isoform 1; Belongs to the nucleosome assembly protein (NAP) family. (376 aa)
TCM_029035Transducin family protein / WD-40 repeat family protein. (453 aa)
TCM_030078Histone H2A; Belongs to the histone H2A family. (135 aa)
TCM_029940Helicase-like transcription factor CHR28. (1382 aa)
TCM_030300PHD finger family protein / bromo-adjacent domain-containing protein isoform 1. (261 aa)
TCM_027588Enhancer of polycomb-like protein. (454 aa)
TCM_036924Chromatin remodeling factor CHD3 isoform 2. (1404 aa)
TCM_036978Phox domain-containing protein isoform 1. (714 aa)
TCM_037353Pentatricopeptide repeat superfamily protein, putative. (722 aa)
TCM_037641Nucleosome assembly protein 1,2 isoform 1; Belongs to the nucleosome assembly protein (NAP) family. (372 aa)
TCM_037580ALF domain class transcription factor isoform 1. (252 aa)
TCM_038119Actin related protein isoform 1; Belongs to the actin family. (435 aa)
TCM_037984Histone H2A; Belongs to the histone H2A family. (135 aa)
TCM_038063Histone superfamily protein. (220 aa)
TCM_039448Pathogenesis related homeodomain protein A, putative isoform 2. (752 aa)
TCM_037278Histone deacetylase 2 isoform 1. (379 aa)
TCM_040842Chromatin remodeling complex subunit isoform 2. (1810 aa)
TCM_001027Histone H3; Belongs to the histone H3 family. (136 aa)
TCM_040553Histone superfamily protein. (176 aa)
TCM_040751Set1/Ash2 histone methyltransferase complex subunit ASH2. (452 aa)
TCM_037714Histone acetyltransferase of the GNAT family 2, putative. (468 aa)
TCM_041266Histone deacetylase 8 isoform 1. (447 aa)
TCM_041451Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. (1028 aa)
TCM_041482Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (456 aa)
TCM_041508Uncharacterized protein. (350 aa)
TCM_041353RuvB-like helicase; Belongs to the RuvB family. (647 aa)
TCM_041563Uncharacterized protein. (148 aa)
TCM_041584Histone H2B; Belongs to the histone H2B family. (142 aa)
TCM_041526DNA/RNA helicase protein isoform 1. (1034 aa)
TCM_041643Pleckstrin. (145 aa)
TCM_041881ACT domain-containing protein isoform 1. (444 aa)
TCM_041887Histone H2B; Belongs to the histone H2B family. (151 aa)
TCM_041961Nfrkb, putative isoform 1. (1379 aa)
TCM_041890Histone H2A; Belongs to the histone H2A family. (149 aa)
TCM_041900Methyl binding domain-like protein. (314 aa)
TCM_042089Chromatin remodeling complex subunit, putative isoform 2. (2585 aa)
TCM_042228HIT-type Zinc finger family protein isoform 1. (172 aa)
TCM_040456Actin-related protein 4 isoform 1; Belongs to the actin family. (438 aa)
TCM_040556Uncharacterized protein. (521 aa)
TCM_041564Histone superfamily protein; Belongs to the histone H2B family. (81 aa)
Your Current Organism:
Theobroma cacao
NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa
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