STRINGSTRING
TCM_005865 TCM_005865 TCM_006533 TCM_006533 TCM_004441 TCM_004441 TCM_007303 TCM_007303 TCM_046999 TCM_046999 TCM_007494 TCM_007494 TCM_007482 TCM_007482 TCM_008731 TCM_008731 TCM_008764 TCM_008764 TCM_010682 TCM_010682 TCM_007200 TCM_007200 TCM_007714 TCM_007714 TCM_011282 TCM_011282 TCM_011455 TCM_011455 TCM_011668 TCM_011668 TCM_011630 TCM_011630 TCM_011854 TCM_011854 TCM_017181 TCM_017181 TCM_017328 TCM_017328 TCM_010128 TCM_010128 TCM_017190 TCM_017190 TCM_017280 TCM_017280 TCM_017324 TCM_017324 TCM_017920 TCM_017920 TCM_010965 TCM_010965 TCM_011085 TCM_011085 TCM_019165 TCM_019165 TCM_019538 TCM_019538 TCM_020345 TCM_020345 TCM_021187 TCM_021187 TCM_021205 TCM_021205 TCM_019414 TCM_019414 TCM_020299 TCM_020299 TCM_022927 TCM_022927 TCM_022560 TCM_022560 TCM_024228 TCM_024228 TCM_021327 TCM_021327 TCM_021468 TCM_021468 TCM_025030 TCM_025030 TCM_033988 TCM_033988 TCM_035007 TCM_035007 TCM_034251 TCM_034251 TCM_036681 TCM_036681 MED11 MED11 TCM_045335 TCM_045335 TCM_045436 TCM_045436 TCM_013953 TCM_013953 MED11-2 MED11-2 TCM_014625 TCM_014625 TCM_014808 TCM_014808 TCM_015362 TCM_015362 TCM_015453 TCM_015453 TCM_015494 TCM_015494 TCM_015416 TCM_015416 MED10 MED10 TCM_016046 TCM_016046 TCM_014652 TCM_014652 TCM_016493 TCM_016493 TCM_027314 TCM_027314 TCM_027239 TCM_027239 TCM_027312 TCM_027312 TCM_027316 TCM_027316 TCM_027598 TCM_027598 TCM_028772 TCM_028772 TCM_028940 TCM_028940 TCM_028708 TCM_028708 TCM_029281 TCM_029281 TCM_016691 TCM_016691 TCM_026905 TCM_026905 TCM_030225 TCM_030225 MED11-3 MED11-3 TCM_030013 TCM_030013 TCM_036818 TCM_036818 TCM_030444 TCM_030444 TCM_030408 TCM_030408 TCM_036794 TCM_036794 TCM_036994 TCM_036994 TCM_029140 TCM_029140 TCM_037493 TCM_037493 TCM_037850 TCM_037850 TCM_037910 TCM_037910 TCM_037494 TCM_037494 TCM_038046 TCM_038046 TCM_033531 TCM_033531 TCM_033453 TCM_033453 TCM_026212 TCM_026212 TCM_031287 TCM_031287 TCM_031864 TCM_031864 TCM_030768 TCM_030768 TCM_026634 TCM_026634 TCM_026631 TCM_026631 TCM_026345 TCM_026345 TCM_026261 TCM_026261 TCM_025935 TCM_025935 TCM_026255 TCM_026255 TCM_025742 TCM_025742 MED4 MED4 TCM_025691 TCM_025691 TCM_029906 TCM_029906 TCM_030286 TCM_030286 TCM_038116 TCM_038116 TCM_038331 TCM_038331 MED20 MED20 TCM_040342 TCM_040342 TCM_041031 TCM_041031 TCM_037975 TCM_037975 TCM_041439 TCM_041439 TCM_041451 TCM_041451 TCM_042222 TCM_042222 TCM_039980 TCM_039980 TCM_000763 TCM_000763 TCM_001077 TCM_001077 TCM_001108 TCM_001108 TCM_000864 TCM_000864 TCM_001425 TCM_001425 TCM_001543 TCM_001543 TCM_001044 TCM_001044 TCM_001866 TCM_001866 TCM_002259 TCM_002259 TCM_000717 TCM_000717 TCM_002578 TCM_002578 TCM_004570 TCM_004570 TCM_001730 TCM_001730 TCM_046983 TCM_046983 TCM_046989 TCM_046989 TCM_004872 TCM_004872 TCM_005268 TCM_005268 TCM_005059 TCM_005059 TCM_005328 TCM_005328 TCM_002958 TCM_002958 TCM_005460 TCM_005460 TCM_006065 TCM_006065
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TCM_005865PHD finger family protein isoform 1. (870 aa)
TCM_006533Coiled-coil domain-containing protein 124 isoform 1. (229 aa)
TCM_004441Tudor/PWWP/MBT domain-containing protein, putative isoform 2. (1421 aa)
TCM_007303Uncharacterized protein. (93 aa)
TCM_046999MED32, putative. (186 aa)
TCM_007494Dentin sialophosphoprotein-related, putative isoform 5. (675 aa)
TCM_007482Calmodulin-binding transcription activator 2. (1064 aa)
TCM_008731Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains isoform 2. (987 aa)
TCM_008764DNAJ heat shock N-terminal domain-containing protein, putative isoform 1. (810 aa)
TCM_010682Uncharacterized protein isoform 1. (1112 aa)
TCM_007200Uncharacterized protein. (354 aa)
TCM_007714Transcription factor jumonji domain-containing protein, putative isoform 1. (1199 aa)
TCM_011282Transcriptional adapter. (593 aa)
TCM_011455Chaperone DnaJ-domain superfamily protein, putative isoform 1. (634 aa)
TCM_011668ATP/GTP-binding family protein, putative isoform 1. (1376 aa)
TCM_011630Prefoldin chaperone subunit family protein. (363 aa)
TCM_011854Phytochrome and flowering time regulatory protein isoform 1. (871 aa)
TCM_017181Chromatin remodeling complex subunit isoform 1. (545 aa)
TCM_017328HDAC_interact domain-containing protein. (326 aa)
TCM_010128WRKY domain class transcription factor. (1446 aa)
TCM_017190Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (111 aa)
TCM_017280HDAC_interact domain-containing protein. (369 aa)
TCM_017324HDAC_interact domain-containing protein. (369 aa)
TCM_017920SIN3-like 2, putative isoform 2. (1391 aa)
TCM_010965GRAS family transcription factor family protein; Belongs to the GRAS family. (615 aa)
TCM_011085Pre-mRNA-processing protein 40C. (816 aa)
TCM_019165GRAS family transcription factor family protein; Belongs to the GRAS family. (655 aa)
TCM_019538Histone acetyltransferase of the CBP family 1, putative. (1461 aa)
TCM_020345LEUNIG_homolog isoform 1. (777 aa)
TCM_021187Uncharacterized protein isoform 1. (888 aa)
TCM_021205Heat shock factor binding protein, putative. (135 aa)
TCM_019414GRAS family transcription factor family protein; Belongs to the GRAS family. (347 aa)
TCM_020299Tudor/PWWP/MBT domain-containing protein, putative isoform 2. (1452 aa)
TCM_022927Serine/threonine-protein kinase irlC isoform 1. (429 aa)
TCM_022560Centroradialis. (172 aa)
TCM_024228Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1985 aa)
TCM_021327Calmodulin binding,transcription regulators, putative isoform 1. (907 aa)
TCM_021468Calmodulin-binding transcription activator 1. (966 aa)
TCM_025030Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. (173 aa)
TCM_033988Uncharacterized protein isoform 2. (224 aa)
TCM_035007Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (444 aa)
TCM_034251Uncharacterized protein. (77 aa)
TCM_036681Surfeit locus protein 5 subunit 22 of Mediator complex. (148 aa)
MED11Mediator of RNA polymerase II transcription subunit 11; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (305 aa)
TCM_045335Agglutinin-like protein ALA1, putative isoform 1. (705 aa)
TCM_045436RING/FYVE/PHD zinc finger superfamily protein, putative isoform 1. (539 aa)
TCM_013953Transcription regulators,zinc ion binding isoform 1. (405 aa)
MED11-2Mediator of RNA polymerase II transcription subunit 11; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (117 aa)
TCM_014625SWIB/MDM2 domain superfamily protein isoform 1. (586 aa)
TCM_014808Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (211 aa)
TCM_015362Heat shock protein binding protein, putative isoform 1. (743 aa)
TCM_015453Histone-lysine N-methyltransferase ATXR6. (356 aa)
TCM_015494GRF1-interacting factor 3. (189 aa)
TCM_015416Transcription factor jumonji domain-containing protein, putative isoform 1. (1682 aa)
MED10Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (190 aa)
TCM_016046Transcription regulatory protein SNF5 (BSH), putative isoform 1. (240 aa)
TCM_014652DNAJ heat shock N-terminal domain-containing protein, putative. (774 aa)
TCM_016493Transcriptional coactivator p15 (PC4) family protein (KELP). (158 aa)
TCM_027314Uncharacterized protein. (309 aa)
TCM_027239Uncharacterized protein. (145 aa)
TCM_027312KIX_2 domain-containing protein. (1367 aa)
TCM_027316KIX_2 domain-containing protein. (1032 aa)
TCM_027598Histone acetyltransferase of the CBP family 12 isoform 1. (1751 aa)
TCM_028772Golgin candidate 5 isoform 1. (964 aa)
TCM_028940RNA polymerase transcriptional regulation mediator-related isoform 1. (257 aa)
TCM_028708Mediator of RNA polymerase II transcription subunit 21; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (137 aa)
TCM_029281Uncharacterized protein. (378 aa)
TCM_016691Zinc knuckle family protein isoform 1. (627 aa)
TCM_026905Prefoldin chaperone subunit family protein, putative isoform 1. (482 aa)
TCM_030225Homeodomain-like superfamily protein, putative isoform 1. (1463 aa)
MED11-3Mediator of RNA polymerase II transcription subunit 11; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (121 aa)
TCM_030013Lysine-specific demethylase 3B, putative isoform 2. (1045 aa)
TCM_036818Uncharacterized protein. (420 aa)
TCM_030444Histone acetyltransferase complex component-like protein. (334 aa)
TCM_030408Transcriptional adapter. (550 aa)
TCM_036794RING/FYVE/PHD zinc finger superfamily protein, putative isoform 1. (497 aa)
TCM_036994Uncharacterized protein isoform 3. (447 aa)
TCM_029140TATA binding protein associated factor 21kDa subunit isoform 1. (206 aa)
TCM_037493J domain-containing protein. (357 aa)
TCM_037850RNA-binding protein-related. (373 aa)
TCM_037910Multiprotein bridging factor 1C. (98 aa)
TCM_037494J domain-containing protein. (361 aa)
TCM_038046RNA polymerase II transcription mediators isoform 1. (663 aa)
TCM_033531Transcription factor jumonji domain-containing protein, putative isoform 1. (1056 aa)
TCM_033453Transcription factor jumonji domain-containing protein, putative isoform 3. (967 aa)
TCM_026212RNA-binding ASCH domain protein isoform 1. (356 aa)
TCM_031287B-box type zinc finger family protein, putative. (272 aa)
TCM_031864Multiprotein bridging factor 1B. (142 aa)
TCM_030768Transcription initiation factor tfiid, putative. (535 aa)
TCM_026634Zinc finger isoform 1. (947 aa)
TCM_026631SANT domain-containing protein. (1013 aa)
TCM_026345Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1813 aa)
TCM_026261SSXT family protein isoform 1. (225 aa)
TCM_025935Surfeit locus protein 5 subunit 22 of Mediator complex. (148 aa)
TCM_026255Uncharacterized protein isoform 1. (167 aa)
TCM_025742Plasma membrane. (285 aa)
MED4Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (417 aa)
TCM_025691Uncharacterized protein isoform 1. (627 aa)
TCM_029906Sensitive to freezing 6. (1249 aa)
TCM_030286Transcription factor jumonji domain-containing protein, putative isoform 1. (918 aa)
TCM_038116Uncharacterized protein. (407 aa)
TCM_038331LisH dimerization motif,WD40/YVTN repeat-like-containing domain isoform 2. (919 aa)
MED20Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (222 aa)
TCM_040342Transcription initiation factor TFIID subunit 11 isoform 1. (225 aa)
TCM_041031Proteasome family protein isoform 1. (439 aa)
TCM_037975GAI/RGA-like protein; Belongs to the GRAS family. (548 aa)
TCM_041439Centroradialis. (174 aa)
TCM_041451Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. (1028 aa)
TCM_042222Uncharacterized protein. (172 aa)
TCM_039980Uncharacterized protein. (79 aa)
TCM_000763Uncharacterized protein. (349 aa)
TCM_001077Mediator of RNA polymerase II transcription subunit 18. (217 aa)
TCM_001108Calmodulin-binding transcription activator 3. (1085 aa)
TCM_000864Little nuclei4, putative isoform 1. (1088 aa)
TCM_001425Trithorax-related protein 5 isoform 1. (381 aa)
TCM_001543SsDNA-binding transcriptional regulator isoform 2. (111 aa)
TCM_001044Uncharacterized protein. (602 aa)
TCM_001866Phy rapidly regulated 1, putative. (216 aa)
TCM_002259Tata box associated factor ii 59. (540 aa)
TCM_000717WD-40 repeat family protein isoform 1. (599 aa)
TCM_002578Mediator of RNA polymerase II transcription subunit 19. (221 aa)
TCM_004570Uncharacterized protein. (838 aa)
TCM_001730Multiprotein bridging factor 1B. (142 aa)
TCM_046983Heat shock factor binding protein. (89 aa)
TCM_046989Transcription factor jumonji domain-containing protein, putative isoform 1. (1211 aa)
TCM_004872Myb-like transcription factor family protein isoform 1. (450 aa)
TCM_005268NAD(P)-binding Rossmann-fold superfamily protein. (647 aa)
TCM_005059GRF1-interacting factor 3. (213 aa)
TCM_005328Mediator of RNA polymerase II transcription subunit 12 isoform 1. (2261 aa)
TCM_002958WD-repeat protein isoform 2. (784 aa)
TCM_005460SIN3 associated polypeptide P18. (153 aa)
TCM_006065Mediator of RNA polymerase II transcription subunit 19 isoform 1. (309 aa)
Your Current Organism:
Theobroma cacao
NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa
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