STRINGSTRING
TCM_010129 TCM_010129 TCM_042754 TCM_042754 TCM_044716 TCM_044716 TCM_044495 TCM_044495 TCM_043270 TCM_043270 TCM_035344 TCM_035344 TCM_042444 TCM_042444 TCM_036535 TCM_036535 TCM_036045 TCM_036045 TCM_035323 TCM_035323 TCM_035834 TCM_035834 TCM_035812 TCM_035812 TCM_031418 TCM_031418 TCM_034247 TCM_034247 TCM_034192 TCM_034192 TCM_033030 TCM_033030 TCM_032899 TCM_032899 TCM_033434 TCM_033434 TCM_031416 TCM_031416 TCM_031417 TCM_031417 TCM_030904 TCM_030904 TCM_026871 TCM_026871 TCM_026431 TCM_026431 TCM_025006 TCM_025006 TCM_022976 TCM_022976 LOS4 LOS4 TCM_021830 TCM_021830 TCM_022104 TCM_022104 TCM_021458 TCM_021458 TCM_021043 TCM_021043 TCM_020550 TCM_020550 TCM_020670 TCM_020670 TCM_020601 TCM_020601 TCM_020661 TCM_020661 TCM_020154 TCM_020154 TCM_016908 TCM_016908 TCM_011517 TCM_011517 TCM_018504 TCM_018504 TCM_017425 TCM_017425 TCM_007746 TCM_007746 TCM_010780 TCM_010780 TCM_007385 TCM_007385 TCM_010200 TCM_010200 TCM_009016 TCM_009016 TCM_005166 TCM_005166 TCM_004857 TCM_004857 TCM_006225 TCM_006225 TCM_005373 TCM_005373 TCM_001934 TCM_001934 TCM_004826 TCM_004826 TCM_004858 TCM_004858 TCM_004856 TCM_004856 TCM_004727 TCM_004727 TCM_001895 TCM_001895 TCM_002115 TCM_002115 TCM_001608 TCM_001608 TCM_001034 TCM_001034 TCM_000848 TCM_000848 TCM_012528 TCM_012528 TCM_012168 TCM_012168 TCM_013705 TCM_013705 TCM_014166 TCM_014166 TCM_045030 TCM_045030 TCM_014817 TCM_014817 TCM_045471 TCM_045471 TCM_015015 TCM_015015 TCM_015799 TCM_015799 TCM_016200 TCM_016200 TCM_014243 TCM_014243 TCM_016214 TCM_016214 TCM_015986 TCM_015986 TCM_014481 TCM_014481 TCM_027151 TCM_027151 TCM_027106 TCM_027106 TCM_029008 TCM_029008 TCM_029076 TCM_029076 TCM_016633 TCM_016633 TCM_029423 TCM_029423 TCM_029762 TCM_029762 TCM_037013 TCM_037013 TCM_037016 TCM_037016 TCM_037320 TCM_037320 TCM_037319 TCM_037319 TCM_037623 TCM_037623 TCM_040183 TCM_040183 TCM_038054 TCM_038054 TCM_041685 TCM_041685 TCM_039723 TCM_039723
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TCM_010129DEAD/DEAH box helicase, putative isoform 1. (1167 aa)
TCM_042754P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1. (1167 aa)
TCM_044716DEAD-box ATP-dependent RNA helicase 35 isoform 1. (653 aa)
TCM_044495DEA(D/H)-box RNA helicase family protein isoform 1. (1142 aa)
TCM_043270RNA helicase family protein. (1389 aa)
TCM_035344annotation not available (175 aa)
TCM_042444RNA helicase. (591 aa)
TCM_036535Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform 1. (1168 aa)
TCM_036045DEA(D/H)-box RNA helicase family protein. (639 aa)
TCM_035323DEAD-box ATP-dependent RNA helicase 29. (792 aa)
TCM_035834Dead box ATP-dependent RNA helicase, putative isoform 2. (395 aa)
TCM_035812DEAD-box ATP-dependent RNA helicase 39 isoform 1. (617 aa)
TCM_031418Uncharacterized protein. (59 aa)
TCM_034247DEA(D/H)-box RNA helicase family protein isoform 2; Belongs to the DEAD box helicase family. (768 aa)
TCM_034192Pre-mRNA-splicing factor ATP-dependent RNA helicase isoform 1. (1185 aa)
TCM_033030DEA(D/H)-box RNA helicase family protein; Belongs to the DEAD box helicase family. (444 aa)
TCM_032899Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform 1. (1279 aa)
TCM_033434RNA helicase 36; Belongs to the DEAD box helicase family. (504 aa)
TCM_031416Uncharacterized protein. (187 aa)
TCM_031417Uncharacterized protein. (199 aa)
TCM_030904RNA helicase. (778 aa)
TCM_026871DEAD box RNA helicase isoform 1. (742 aa)
TCM_026431P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1. (882 aa)
TCM_025006P-loop containing nucleoside triphosphate hydrolases superfamily protein. (617 aa)
TCM_022976RNA helicase family protein isoform 1. (1037 aa)
LOS4P-loop containing nucleoside triphosphate hydrolases superfamily protein. (502 aa)
TCM_021830Copper ion transmembrane transporters. (313 aa)
TCM_022104P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1. (532 aa)
TCM_021458DEAD box RNA helicase family protein isoform 2. (1158 aa)
TCM_021043P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1. (870 aa)
TCM_020550P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1. (477 aa)
TCM_020670ATP-dependent RNA and DNA helicase, putative isoform 4. (571 aa)
TCM_020601Gag-pro-like protein. (650 aa)
TCM_020661P-loop containing nucleoside triphosphate hydrolases superfamily protein. (876 aa)
TCM_020154P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1; Belongs to the DEAD box helicase family. (687 aa)
TCM_016908DEAD-box ATP-dependent RNA helicase 46 isoform 2; Belongs to the DEAD box helicase family. (772 aa)
TCM_011517RNA helicase family protein isoform 1. (764 aa)
TCM_018504ATP-dependent RNA helicase SUPV3L1 isoform 2. (889 aa)
TCM_017425P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1. (543 aa)
TCM_007746Eukaryotic initiation factor 4A-III isoform 1. (406 aa)
TCM_010780RNA helicase family protein isoform 1. (700 aa)
TCM_007385INO80 complex subunit C. (123 aa)
TCM_010200DEA(D/H)-box RNA helicase family protein isoform 1. (585 aa)
TCM_009016DEA(D/H)-box RNA helicase family protein. (1232 aa)
TCM_005166P-loop containing nucleoside triphosphate hydrolases superfamily protein. (793 aa)
TCM_004857RNA helicase family protein. (225 aa)
TCM_006225ATP-dependent RNA helicase, putative isoform 1. (1457 aa)
TCM_005373RNAhelicase-like 8 isoform 1; Belongs to the DEAD box helicase family. (501 aa)
TCM_001934ATP-dependent RNA helicase, putative isoform 1. (1207 aa)
TCM_004826P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1. (838 aa)
TCM_004858Uncharacterized protein. (191 aa)
TCM_004856Pre-mRNA-splicing factor ATP-dependent RNA helicase isoform 3. (746 aa)
TCM_004727RNA helicase family protein, putative. (1264 aa)
TCM_001895DEAD-box ATP-dependent RNA helicase 53 isoform 3. (635 aa)
TCM_002115Uncharacterized protein isoform 1. (864 aa)
TCM_001608DEAD domain-containing protein. (162 aa)
TCM_001034ATP-dependent RNA helicase DEAH11, chloroplastic. (1758 aa)
TCM_000848P-loop containing nucleoside triphosphate hydrolases superfamily protein. (618 aa)
TCM_012528DEA(D/H)-box RNA helicase family protein isoform 1. (1193 aa)
TCM_012168P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1; Belongs to the DEAD box helicase family. (626 aa)
TCM_013705DDT domain-containing protein. (730 aa)
TCM_014166RNA helicase family protein isoform 2. (1055 aa)
TCM_045030U5 small nuclear ribonucleoprotein helicase, putative isoform 1. (2176 aa)
TCM_014817Uncharacterized protein. (188 aa)
TCM_045471RNA helicase. (599 aa)
TCM_015015DEAD-box ATP-dependent RNA helicase 7. (1077 aa)
TCM_015799Regulator of nonsense transcripts 1. (1266 aa)
TCM_016200P-loop containing nucleoside triphosphate hydrolases superfamily protein. (560 aa)
TCM_014243U5 small nuclear ribonucleoprotein helicase isoform 1. (2099 aa)
TCM_016214DEA(D/H)-box RNA helicase family protein isoform 1. (837 aa)
TCM_015986P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 4. (473 aa)
TCM_014481RNA helicase. (628 aa)
TCM_027151DEAD/DEAH box RNA helicase family protein isoform 1. (427 aa)
TCM_027106RNA helicase, ATP-dependent, SK12/DOB1 protein. (987 aa)
TCM_029008DEA(D/H)-box RNA helicase family protein; Belongs to the DEAD box helicase family. (505 aa)
TCM_029076Eukaryotic translation initiation factor 4A1 isoform 1; Belongs to the DEAD box helicase family. (413 aa)
TCM_016633DEA(D/H)-box RNA helicase family protein isoform 1; Belongs to the DEAD box helicase family. (550 aa)
TCM_029423RNA helicase 1. (515 aa)
TCM_029762RNA helicase family protein isoform 1. (697 aa)
TCM_037013DEAD/DEAH box RNA helicase family protein isoform 1. (485 aa)
TCM_037016Concanavalin A-like lectin protein kinase family protein, putative. (638 aa)
TCM_037320Eukaryotic translation initiation factor 4A1; Belongs to the DEAD box helicase family. (413 aa)
TCM_037319Eukaryotic translation initiation factor 4A1; Belongs to the DEAD box helicase family. (412 aa)
TCM_037623Eukaryotic translation initiation factor 4A1 isoform 1; Belongs to the DEAD box helicase family. (413 aa)
TCM_040183Dead box ATP-dependent RNA helicase, putative isoform 1. (622 aa)
TCM_038054P-loop containing nucleoside triphosphate hydrolases superfamily protein. (628 aa)
TCM_041685RNA helicase, ATP-dependent, SK12/DOB1 protein isoform 1. (1441 aa)
TCM_039723RNA helicase, ATP-dependent, SK12/DOB1 protein isoform 1. (990 aa)
Your Current Organism:
Theobroma cacao
NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa
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