31 items (Theobroma cacao) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TCM_036105	Uncharacterized protein. (148 aa)
	TCM_026667	Uncharacterized protein. (64 aa)
	TCM_025183	Translation protein SH3-like family protein. (146 aa)
	TCM_026410	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (990 aa)
	TCM_024222	Nascent polypeptide-associated complex subunit beta. (161 aa)
	TCM_026404	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (134 aa)
	TCM_024196	Nascent polypeptide-associated complex subunit beta. (161 aa)
	TCM_022076	Ribosomal protein L4/L1 family isoform 1. (408 aa)
	TCM_020132	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (337 aa)
	TCM_021541	RNA-binding protein, putative isoform 3. (501 aa)
	TCM_021398	Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit alpha family. (193 aa)
	TCM_021232	Ribosomal L22e protein family isoform 1. (125 aa)
	TCM_020621	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (139 aa)
	TCM_007272	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2475 aa)
	TCM_007000	RNA-binding protein, putative isoform 1. (440 aa)
	TCM_004661	Ribosomal L22e family protein isoform 1. (134 aa)
	TCM_001268	Ribosomal protein L4/L1 family. (406 aa)
	TCM_004423	Target of rapamycin. (126 aa)
	TCM_000792	Translation protein SH3-like family protein. (146 aa)
	TCM_000149	Winged-helix DNA-binding transcription factor family protein, putative. (533 aa)
	TCM_027574	Target of rapamycin-like protein. (272 aa)
	TCM_028994	Ubiquitin-conjugating enzyme family protein. (415 aa)
	TCM_029499	Translation initiation factor eIF-2B subunit delta, putative isoform 1. (387 aa)
	TCM_037080	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (138 aa)
	TCM_042031	Lupus la ribonucleoprotein, putative isoform 3. (893 aa)
	TCM_041412	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (216 aa)
	TCM_027419	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (138 aa)
	TCM_043082	ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...] (168 aa)
	TCM_022089	Ribosomal protein S12/S23 family protein isoform 1; Belongs to the universal ribosomal protein uS12 family. (142 aa)
	TCM_043050	Regulator of nonsense transcripts 2 isoform 1. (1193 aa)
	TCM_034273	Winged-helix DNA-binding transcription factor family protein, putative. (550 aa)

Your Current Organism:

Theobroma cacao

NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TCM_000792	TCM_001268	A0A061DP29	A0A061DQT3	Translation protein SH3-like family protein.	Ribosomal protein L4/L1 family.	0.972
TCM_000792	TCM_004661	A0A061DP29	A0A061DSM0	Translation protein SH3-like family protein.	Ribosomal L22e family protein isoform 1.	0.968
TCM_000792	TCM_020132	A0A061DP29	A0A061ERR4	Translation protein SH3-like family protein.	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	0.542
TCM_000792	TCM_020621	A0A061DP29	A0A061EL13	Translation protein SH3-like family protein.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.958
TCM_000792	TCM_021232	A0A061DP29	A0A061END0	Translation protein SH3-like family protein.	Ribosomal L22e protein family isoform 1.	0.968
TCM_000792	TCM_022076	A0A061DP29	A0A061ERT5	Translation protein SH3-like family protein.	Ribosomal protein L4/L1 family isoform 1.	0.972
TCM_000792	TCM_022089	A0A061DP29	A0A061FNR5	Translation protein SH3-like family protein.	Ribosomal protein S12/S23 family protein isoform 1; Belongs to the universal ribosomal protein uS12 family.	0.994
TCM_000792	TCM_024196	A0A061DP29	A0A061EVS4	Translation protein SH3-like family protein.	Nascent polypeptide-associated complex subunit beta.	0.813
TCM_000792	TCM_024222	A0A061DP29	A0A061F327	Translation protein SH3-like family protein.	Nascent polypeptide-associated complex subunit beta.	0.813
TCM_000792	TCM_025183	A0A061DP29	A0A061F5L5	Translation protein SH3-like family protein.	Translation protein SH3-like family protein.	0.900
TCM_000792	TCM_026404	A0A061DP29	A0A061F2L7	Translation protein SH3-like family protein.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.958
TCM_000792	TCM_026667	A0A061DP29	A0A061FAJ7	Translation protein SH3-like family protein.	Uncharacterized protein.	0.968
TCM_000792	TCM_027419	A0A061DP29	A0A061GA51	Translation protein SH3-like family protein.	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	0.942
TCM_000792	TCM_037080	A0A061DP29	A0A061GKA3	Translation protein SH3-like family protein.	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	0.942
TCM_000792	TCM_041412	A0A061DP29	A0A061GZQ4	Translation protein SH3-like family protein.	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.	0.961
TCM_001268	TCM_000792	A0A061DQT3	A0A061DP29	Ribosomal protein L4/L1 family.	Translation protein SH3-like family protein.	0.972
TCM_001268	TCM_004661	A0A061DQT3	A0A061DSM0	Ribosomal protein L4/L1 family.	Ribosomal L22e family protein isoform 1.	0.961
TCM_001268	TCM_020132	A0A061DQT3	A0A061ERR4	Ribosomal protein L4/L1 family.	Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	0.860
TCM_001268	TCM_020621	A0A061DQT3	A0A061EL13	Ribosomal protein L4/L1 family.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.968
TCM_001268	TCM_021232	A0A061DQT3	A0A061END0	Ribosomal protein L4/L1 family.	Ribosomal L22e protein family isoform 1.	0.961