STRINGSTRING
TCM_002348 TCM_002348 TCM_000288 TCM_000288 TCM_000078 TCM_000078 TCM_000679 TCM_000679 TCM_000854 TCM_000854 TCM_001055 TCM_001055 TCM_001195 TCM_001195 TCM_001299 TCM_001299 TCM_000903 TCM_000903 TCM_001271 TCM_001271 TCM_001454 TCM_001454 TCM_002297 TCM_002297 TCM_002694 TCM_002694 TCM_002984 TCM_002984 TCM_002265 TCM_002265 TCM_000771 TCM_000771 TCM_000905 TCM_000905 TCM_004434 TCM_004434 TCM_001307 TCM_001307 TCM_004906 TCM_004906 TCM_004945 TCM_004945 TCM_004325 TCM_004325 TCM_001538 TCM_001538 TCM_004911 TCM_004911 TCM_005103 TCM_005103 GCP1 GCP1 TCM_005867 TCM_005867 TCM_005527 TCM_005527 TCM_006169 TCM_006169 TCM_006429 TCM_006429 TCM_005921 TCM_005921 TCM_006228 TCM_006228 TCM_006321 TCM_006321 TCM_006889 TCM_006889 TCM_006511 TCM_006511 TCM_006975 TCM_006975 TCM_005369 TCM_005369 TCM_007227 TCM_007227 TCM_005444 TCM_005444 TCM_007751 TCM_007751 TCM_005719 TCM_005719 TCM_007599 TCM_007599 TCM_007698 TCM_007698 TCM_008818 TCM_008818 TCM_008191 TCM_008191 TCM_006287 TCM_006287 TCM_006354 TCM_006354 TCM_008129 TCM_008129 TCM_009742 TCM_009742 TCM_009231 TCM_009231 TCM_009420 TCM_009420 TCM_006765 TCM_006765 TCM_010409 TCM_010409 TCM_007059 TCM_007059 TCM_010314 TCM_010314 TCM_010522 TCM_010522 TCM_011276 TCM_011276 TCM_011364 TCM_011364 TCM_011445 TCM_011445 TCM_011151 TCM_011151 TCM_011165 TCM_011165 TCM_007613 TCM_007613 TCM_011195 TCM_011195 TCM_008099 TCM_008099 TCM_008156 TCM_008156 TCM_008329 TCM_008329 TCM_016926 TCM_016926 TCM_016990 TCM_016990 TCM_011900 TCM_011900 TCM_016930 TCM_016930 TCM_010280 TCM_010280 TCM_017194 TCM_017194 TCM_017840 TCM_017840 TCM_018358 TCM_018358 TCM_018687 TCM_018687 TCM_017824 TCM_017824 TCM_018962 TCM_018962 TCM_011153 TCM_011153 TCM_019284 TCM_019284 TCM_019154 TCM_019154 TCM_019889 TCM_019889 TCM_020258 TCM_020258 TCM_017033 TCM_017033 TCM_020554 TCM_020554 TCM_020371 TCM_020371 TCM_017518 TCM_017518 TCM_020274 TCM_020274 TCM_020377 TCM_020377 TCM_018393 TCM_018393 TCM_018498 TCM_018498 GATB GATB TCM_021201 TCM_021201 TCM_019438 TCM_019438 TCM_021296 TCM_021296 TCM_021675 TCM_021675 TCM_019993 TCM_019993 GCP2 GCP2 TCM_022236 TCM_022236 TCM_020284 TCM_020284 TCM_021992 TCM_021992 TCM_020503 TCM_020503 TCM_023045 TCM_023045 TCM_024568 TCM_024568 TCM_024636 TCM_024636 TCM_021502 TCM_021502 TCM_021556 TCM_021556 TCM_024598 TCM_024598 TCM_024635 TCM_024635 TCM_021740 TCM_021740 TCM_025207 TCM_025207 TCM_025741 TCM_025741 TCM_025463 TCM_025463 TCM_025856 TCM_025856 TCM_025733 TCM_025733 TCM_025836 TCM_025836 TCM_026406 TCM_026406 TCM_024632 TCM_024632 MOCS3 MOCS3 TCM_047055 TCM_047055 TCM_030946 TCM_030946 TCM_031290 TCM_031290 TCM_025952 TCM_025952 TCM_033028 TCM_033028 TCM_032558 TCM_032558 TCM_033874 TCM_033874 TCM_034281 TCM_034281 TCM_034037 TCM_034037 TCM_031111 TCM_031111 TCM_034331 TCM_034331 TCM_046884 TCM_046884 TCM_034282 TCM_034282 TCM_031717 TCM_031717 TCM_034847 TCM_034847 TCM_034858 TCM_034858 TCM_032159 TCM_032159 TCM_034959 TCM_034959 TCM_035075 TCM_035075 TCM_032306 TCM_032306 TCM_034904 TCM_034904 TCM_034984 TCM_034984 TCM_036196 TCM_036196 TCM_036384 TCM_036384 TCM_034115 TCM_034115 TCM_036466 TCM_036466 TCM_042519 TCM_042519 TCM_036578 TCM_036578 TCM_046886 TCM_046886 NCS6 NCS6 TCM_042752 TCM_042752 TCM_042814 TCM_042814 TCM_043037 TCM_043037 TCM_043261 TCM_043261 TCM_043318 TCM_043318 GATA GATA TCM_044587 TCM_044587 TCM_036201 TCM_036201 TCM_045460 TCM_045460 TCM_045490 TCM_045490 TCM_044785 TCM_044785 TCM_045527 TCM_045527 TCM_045617 TCM_045617 TCM_045619 TCM_045619 TCM_042811 TCM_042811 TCM_046738 TCM_046738 TCM_014367 TCM_014367 TCM_014731 TCM_014731 TCM_045543 TCM_045543 TCM_014767 TCM_014767 TCM_045611 TCM_045611 TCM_014566 TCM_014566 TCM_015230 TCM_015230 TCM_012055 TCM_012055 TCM_015923 TCM_015923 TCM_015848 TCM_015848 TCM_015994 TCM_015994 TCM_016717 TCM_016717 TCM_015000 TCM_015000 TCM_027755 TCM_027755 TCM_028839 TCM_028839 TCM_015963 TCM_015963 TCM_029142 TCM_029142 TCM_030392 TCM_030392 TCM_027607 TCM_027607 TCM_030226 TCM_030226 TCM_030285 TCM_030285 TCM_028965 TCM_028965 GATC GATC TCM_047089 TCM_047089 TCM_037856 TCM_037856 TCM_029768 TCM_029768 TCM_037764 TCM_037764 TCM_037932 TCM_037932 TCM_037870 TCM_037870 TCM_037793 TCM_037793 TCM_030223 TCM_030223 TCM_036751 TCM_036751 TCM_038835 TCM_038835 TCM_039087 TCM_039087 TCM_039322 TCM_039322 TCM_038578 TCM_038578 TCM_038609 TCM_038609 TCM_037221 TCM_037221 TCM_037322 TCM_037322 TCM_039450 TCM_039450 TCM_039779 TCM_039779 TCM_040691 TCM_040691 TCM_040771 TCM_040771 TCM_040892 TCM_040892 TCM_037720 TCM_037720 TCM_041312 TCM_041312 TCM_041099 TCM_041099 TCM_041088 TCM_041088 TCM_041147 TCM_041147 TCM_041225 TCM_041225 TCM_041355 TCM_041355 TCM_041214 TCM_041214 TCM_041492 TCM_041492 TCM_041460 TCM_041460 TCM_038590 TCM_038590 TCM_042104 TCM_042104 TCM_041940 TCM_041940 TCM_042326 TCM_042326 TCM_040409 TCM_040409 TCM_040796 TCM_040796 TCM_041227 TCM_041227 TCM_042258 TCM_042258
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TCM_002348Uncharacterized protein. (108 aa)
TCM_000288CDK5RAP1-like protein isoform 1. (616 aa)
TCM_000078Polynucleotide adenylyltransferase family protein, putative; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (714 aa)
TCM_000679FMN-linked oxidoreductases superfamily protein. (434 aa)
TCM_000854GTP-binding protein hflx, putative. (614 aa)
TCM_001055S-adenosyl-L-methionine-dependent methyltransferases superfamily protein, putative isoform 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (848 aa)
TCM_001195Uncharacterized protein. (127 aa)
TCM_001299Ribosomal RNA processing 4. (319 aa)
TCM_000903Uncharacterized protein. (313 aa)
TCM_001271RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1033 aa)
TCM_001454Chloroplastic NIFS-like cysteine desulfurase isoform 1. (666 aa)
TCM_002297Threonyl-tRNA synthetase / threonine--tRNA ligase, putative isoform 1. (668 aa)
TCM_002694Aspartyl-tRNA synthetase, putative. (619 aa)
TCM_002984Alba DNA/RNA-binding protein isoform 1. (242 aa)
TCM_002265Metallo-hydrolase/oxidoreductase superfamily protein. (353 aa)
TCM_000771Queuosine salvage protein; Involved in salvaging queuosine. (306 aa)
TCM_000905tRNA-dihydrouridine synthase; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs; Belongs to the dus family. (326 aa)
TCM_004434Isopentenyltransferase 3, putative. (322 aa)
TCM_001307Alba DNA/RNA-binding protein. (263 aa)
TCM_004906Methyltransferases isoform 1. (458 aa)
TCM_004945Class II aaRS and biotin synthetases superfamily protein isoform 2. (509 aa)
TCM_004325tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family. (449 aa)
TCM_001538Glucose-inhibited division family A protein isoform 1. (725 aa)
TCM_004911Transducin family protein / WD-40 repeat family protein, putative. (1386 aa)
TCM_005103DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (112 aa)
GCP1Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in mitochondrial tRNAs that read codons beginning with adenine. Probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Involved in mitochondrial genome maintenance. (468 aa)
TCM_005867FMN-linked oxidoreductases superfamily protein isoform 1. (436 aa)
TCM_005527RNA 2'-phosphotransferase isoform 1. (294 aa)
TCM_006169tRNA pseudouridine synthase. (374 aa)
TCM_006429Alba DNA/RNA-binding protein isoform 1. (257 aa)
TCM_005921AGAMOUS-like 26 isoform 1. (266 aa)
TCM_006228Class II aminoacyl-tRNA and biotin synthetases superfamily protein. (451 aa)
TCM_006321tRNA synthetase class II D. (694 aa)
TCM_006889Phenylalanyl-tRNA synthetase / phenylalanine--tRNA ligase, putative isoform 1. (488 aa)
TCM_006511Probable alanine--tRNA ligase, chloroplastic; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family. (999 aa)
TCM_006975CSL zinc finger domain-containing protein. (238 aa)
TCM_005369Adenosine deaminases,RNA binding,RNA binding,adenosine deaminases, putative isoform 1. (426 aa)
TCM_007227Radical SAM superfamily protein isoform 1. (373 aa)
TCM_005444Ubiquitin-related modifier 1 homolog; Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins. The thiocarboxylated form serves as substrate for conjugation and oxidative stress spec [...] (99 aa)
TCM_007751Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family. (1015 aa)
TCM_005719Glycine-tRNA ligases. (1071 aa)
TCM_007599Glutamate tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (621 aa)
TCM_007698Methyltransferases,nucleic acid binding. (483 aa)
TCM_008818Uncharacterized protein. (92 aa)
TCM_008191Uncharacterized protein. (81 aa)
TCM_006287CSL zinc finger domain-containing protein isoform 1. (82 aa)
TCM_006354Seryl-tRNA synthetase / serine--tRNA ligase isoform 1. (447 aa)
TCM_008129Uncharacterized protein. (76 aa)
TCM_009742Cytokinin biosynthetic isopentenyltransferase, putative. (409 aa)
TCM_009231tRNA synthetase class I (I, L, M and V) family protein isoform 1; Belongs to the class-I aminoacyl-tRNA synthetase family. (1093 aa)
TCM_009420Elongator protein 2 isoform 1. (839 aa)
TCM_006765tRNA-dihydrouridine(47) synthase [NAD(P)(+)]. (699 aa)
TCM_010409RNA polymerases N / 8 kDa subunit. (113 aa)
TCM_007059Uncharacterized protein isoform 1; Belongs to the CGI121/TPRKB family. (194 aa)
TCM_010314Radical SAM superfamily protein isoform 1. (468 aa)
TCM_010522Uncharacterized protein. (107 aa)
TCM_011276Uncharacterized protein. (113 aa)
TCM_0113643'-5' exonuclease, putative. (959 aa)
TCM_011445D-aminoacyl-tRNA deacylases isoform 1. (333 aa)
TCM_011151tRNA delta(2)-isopentenylpyrophosphate transferase. (321 aa)
TCM_011165THUMP domain-containing protein. (344 aa)
TCM_007613Mitochondrial transcription termination factor family protein. (332 aa)
TCM_011195tRNA delta(2)-isopentenylpyrophosphate transferase, putative. (329 aa)
TCM_008099DTW domain-containing protein isoform 1. (401 aa)
TCM_008156Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, putative; Belongs to the plant LTP family. (114 aa)
TCM_008329Glycyl-tRNA synthetase / glycine--tRNA ligase. (739 aa)
TCM_016926tRNA (adenine(58)-N(1))-methyltransferase. (310 aa)
TCM_016990Pseudouridine synthase family protein isoform 1. (526 aa)
TCM_011900tRNA arginine adenosine deaminase, putative isoform 1. (1317 aa)
TCM_016930Polyribonucleotide nucleotidyltransferase, putative isoform 1. (980 aa)
TCM_010280Threonyl-tRNA synthetase isoform 1. (715 aa)
TCM_017194DHBP synthase RibB-like alpha/beta domain isoform 1. (352 aa)
TCM_017840NAD(P)-binding Rossmann-fold superfamily protein isoform 1. (458 aa)
TCM_018358Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily. (443 aa)
TCM_018687tRNA/rRNA methyltransferase family protein. (346 aa)
TCM_017824Uncharacterized protein. (72 aa)
TCM_018962tRNA (guanine(26)-N(2))-dimethyltransferase. (581 aa)
TCM_011153tRNA delta(2)-isopentenylpyrophosphate transferase, putative. (321 aa)
TCM_019284Formyltransferase, putative isoform 1. (362 aa)
TCM_019154ATP binding,valine-tRNA ligase isoform 1; Belongs to the class-I aminoacyl-tRNA synthetase family. (971 aa)
TCM_019889Lysine--tRNA ligase. (620 aa)
TCM_020258Phenylalanyl-tRNA synthetase class IIc family protein. (724 aa)
TCM_017033Multidrug resistance pump, putative isoform 1. (574 aa)
TCM_020554Seryl-tRNA synthetase / serine--tRNA ligase, putative. (202 aa)
TCM_020371Uncharacterized protein. (257 aa)
TCM_017518Lysine--tRNA ligase. (658 aa)
TCM_020274Methionine--tRNA ligase / methionyl-tRNA synthetase / MetRS, putative isoform 1; Belongs to the class-I aminoacyl-tRNA synthetase family. (800 aa)
TCM_020377Alba DNA/RNA-binding-like protein. (336 aa)
TCM_018393Uncharacterized protein. (675 aa)
TCM_018498DUF2428 domain-containing protein. (2221 aa)
GATBGlutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily. (549 aa)
TCM_021201Alanine--tRNA ligase. (257 aa)
TCM_019438Uncharacterized protein isoform 1. (377 aa)
TCM_021296tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family. (251 aa)
TCM_021675Lysine--tRNA ligase. (604 aa)
TCM_019993Cysteinyl-tRNA synthetase, class Ia family protein, ARATH isoform 1. (576 aa)
GCP2Probable tRNA N6-adenosine threonylcarbamoyltransferase; Component of the EKC/KEOPS complex that is required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. The complex is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Likely plays a direct catalytic role in this reaction, but requires other protein(s) of the complex to fulfill this activity. (351 aa)
TCM_022236Histidyl-tRNA synthetase 1 isoform 1. (506 aa)
TCM_020284Ribonuclease P family protein / Rpp14 family protein isoform 1. (154 aa)
TCM_021992Uncharacterized protein. (194 aa)
TCM_020503Isopentenyltransferase 5, putative. (326 aa)
TCM_023045Uncharacterized protein. (243 aa)
TCM_024568Cytidine/deoxycytidylate deaminase family protein, putative isoform 1. (420 aa)
TCM_0246363'-5'-exoribonuclease family protein. (302 aa)
TCM_021502tRNA pseudouridine synthase. (322 aa)
TCM_021556tRNA synthetase class I (I, L, M and V) family protein isoform 2; Belongs to the class-I aminoacyl-tRNA synthetase family. (1191 aa)
TCM_024598Uncharacterized protein isoform 1. (262 aa)
TCM_024635Cytoplasmic tRNA 2-thiolation protein 2; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with NCS6/CTU1 that ligates sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. (464 aa)
TCM_021740Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs. (316 aa)
TCM_025207Class II aaRS and biotin synthetases superfamily protein, putative. (739 aa)
TCM_025741RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of plastid-encoded RNA polymerase (PEP) to specific initiation sites and are then released. (623 aa)
TCM_0254633'-5'-exoribonuclease family protein isoform 1. (453 aa)
TCM_025856Polynucleotidyl transferase, putative isoform 1. (920 aa)
TCM_025733tRNA methyltransferase. (324 aa)
TCM_025836Polyribonucleotide nucleotidyltransferase isoform 1. (946 aa)
TCM_026406Cytidine/deoxycytidylate deaminase family protein isoform 1. (186 aa)
TCM_024632DTW domain-containing protein, putative. (255 aa)
MOCS3Adenylyltransferase and sulfurtransferase MOCS3; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers URM1 and MOCS2A. Its N-terminus first activates URM1 and MOCS2A as acyl- adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 and MOCS2A to form thiocarboxylation (- COSH) of their C-terminus. The reaction probably involves hydrogen sulfide [...] (462 aa)
TCM_047055Glutamyl/glutaminyl-tRNA synthetase, class Ic; Belongs to the class-I aminoacyl-tRNA synthetase family. (731 aa)
TCM_030946DTW domain-containing protein, putative. (475 aa)
TCM_031290tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family. (589 aa)
TCM_025952Leucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family. (1089 aa)
TCM_033028Uncharacterized protein. (179 aa)
TCM_032558Valyl-tRNA synthetase / valine--tRNA ligase (VALRS)-like protein. (219 aa)
TCM_033874DNAJ heat shock N-terminal domain-containing protein isoform 1. (175 aa)
TCM_034281Alba DNA/RNA-binding protein. (251 aa)
TCM_034037Flavodoxin family protein / radical SAM domain-containing protein isoform 1. (637 aa)
TCM_031111tRNAse Z1 isoform 1. (300 aa)
TCM_034331Pseudouridine synthase family protein, putative isoform 1. (548 aa)
TCM_046884tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6; Substrate-binding subunit of tRNA (adenine-N1-)- methyltransferase, which catalyzes the formation of N1-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA. (451 aa)
TCM_034282Thioredoxin superfamily protein. (466 aa)
TCM_031717Isopentenyltransferase 9 isoform 1; Belongs to the IPP transferase family. (449 aa)
TCM_034847Queuine tRNA-ribosyltransferase catalytic subunit 1; Catalytic subunit of the queuine tRNA-ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, formi [...] (398 aa)
TCM_034858Seryl-tRNA synthetase isoform 1. (523 aa)
TCM_032159Tyrosine--tRNA ligase. (542 aa)
TCM_034959tRNA modification GTPase; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. (564 aa)
TCM_035075YbaK/aminoacyl-tRNA synthetase-associated domain isoform 2. (321 aa)
TCM_032306Glutamine-tRNA ligase / glutaminyl-tRNA synthetas, putative isoform 2; Belongs to the class-I aminoacyl-tRNA synthetase family. (797 aa)
TCM_034904Trm112p-like protein. (124 aa)
TCM_034984S-adenosyl-L-methionine-dependent methyltransferases superfamily protein isoform 1. (388 aa)
TCM_036196Uncharacterized protein. (102 aa)
TCM_036384Polynucleotide adenylyltransferase family protein isoform 1; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (586 aa)
TCM_034115GTP-binding protein isoform 1. (544 aa)
TCM_036466Methylthiotransferase. (623 aa)
TCM_042519Elongator complex protein 4 isoform 1. (387 aa)
TCM_036578Uncharacterized protein. (125 aa)
TCM_046886Eukaryotic initiation factor 3 gamma subunit family protein. (417 aa)
NCS6Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. (355 aa)
TCM_042752Radical SAM superfamily protein. (456 aa)
TCM_042814Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. (1339 aa)
TCM_043037Elongator protein 6, putative isoform 1. (260 aa)
TCM_0432613'-5'-exoribonuclease family protein isoform 7. (288 aa)
TCM_043318Pseudouridine synthase. (507 aa)
GATAGlutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). (544 aa)
TCM_044587Uncharacterized protein. (247 aa)
TCM_036201Queuine tRNA-ribosyltransferase accessory subunit 2; Non-catalytic subunit of the queuine tRNA-ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine); Belongs to the queuine tRNA-ribosyltransferase family. QTRT2 subfamily. (405 aa)
TCM_045460Uncharacterized protein. (125 aa)
TCM_045490OB-fold nucleic acid binding domain-containing protein isoform 1. (409 aa)
TCM_044785Polynucleotide adenylyltransferase family protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (579 aa)
TCM_045527Pseudouridine synthase family protein isoform 2. (478 aa)
TCM_045617Hydrolase, putative. (126 aa)
TCM_045619Uncharacterized protein isoform 1. (150 aa)
TCM_042811Methionyl-tRNA synthetase / methionine--tRNA ligase / MetRS (CpMetRS); Belongs to the class-I aminoacyl-tRNA synthetase family. (612 aa)
TCM_046738tRNA synthetase beta subunit family protein. (591 aa)
TCM_014367D-aminoacyl-tRNA deacylases, putative. (323 aa)
TCM_014731Polynucleotide adenylyltransferase family protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (528 aa)
TCM_045543tRNA (guanine(26)-N(2))-dimethyltransferase. (434 aa)
TCM_014767Glycyl-tRNA synthetase / glycine--tRNA ligase. (627 aa)
TCM_045611Nucleic acid-binding isoform 1. (264 aa)
TCM_014566Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. (564 aa)
TCM_015230Class II aaRS and biotin synthetases superfamily protein. (598 aa)
TCM_012055PNAS-3 related isoform 1. (240 aa)
TCM_015923Uncharacterized protein. (103 aa)
TCM_015848tRNA/rRNA methyltransferase family protein isoform 1. (2141 aa)
TCM_015994YbaK/aminoacyl-tRNA synthetase-associated domain isoform 1. (230 aa)
TCM_016717RNA-binding (RRM/RBD/RNP motifs) family protein isoform 1. (338 aa)
TCM_015000Uncharacterized protein. (64 aa)
TCM_027755Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family. (386 aa)
TCM_028839tRNAse Z4 isoform 1. (967 aa)
TCM_015963Class II aminoacyl-tRNA and biotin synthetases superfamily protein isoform 1. (570 aa)
TCM_029142Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. (982 aa)
TCM_030392tRNA--methyltransferase isoform 1. (323 aa)
TCM_027607Uncharacterized protein. (103 aa)
TCM_030226tRNAHis guanylyltransferase. (523 aa)
TCM_030285tRNA synthetase class I (I, L, M and V) family protein isoform 1; Belongs to the class-I aminoacyl-tRNA synthetase family. (980 aa)
TCM_028965RNA methyltransferase family protein isoform 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (543 aa)
GATCGlutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatC family. (140 aa)
TCM_047089RNA recognition motif-containing protein, putative. (454 aa)
TCM_037856Aceous RNase P 1, putative isoform 1. (872 aa)
TCM_029768D-aminoacyl-tRNA deacylase. (198 aa)
TCM_037764Arginyl-tRNA synthetase, class Ic isoform 1; Belongs to the class-I aminoacyl-tRNA synthetase family. (648 aa)
TCM_037932tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family. (499 aa)
TCM_037870Adenine nucleotide alpha hydrolases-like superfamily protein, putative isoform 1. (704 aa)
TCM_037793Initiator tRNA phosphoribosyl transferase family protein isoform 1. (516 aa)
TCM_030223Met-10+ like family protein / kelch repeat-containing protein, putative isoform 1. (1048 aa)
TCM_036751Class II aminoacyl-tRNA and biotin synthetases superfamily protein isoform 1. (543 aa)
TCM_038835Cysteinyl-tRNA synthetase. (536 aa)
TCM_039087Pseudouridine synthase, putative. (122 aa)
TCM_039322Valyl-tRNA synthetase / valine--tRNA ligase (VALRS) isoform 1; Belongs to the class-I aminoacyl-tRNA synthetase family. (1060 aa)
TCM_038578Uncharacterized protein. (84 aa)
TCM_038609Uncharacterized protein isoform 1. (391 aa)
TCM_037221Nucleotidylyl transferase superfamily protein isoform 1; Belongs to the class-I aminoacyl-tRNA synthetase family. (441 aa)
TCM_037322S-adenosyl-L-methionine-dependent methyltransferases superfamily protein isoform 1. (549 aa)
TCM_039450Cytidine/deoxycytidylate deaminase family protein isoform 1. (202 aa)
TCM_039779tRNA pseudouridine synthase. (446 aa)
TCM_040691Transferases,tRNA-methyltransferases. (1075 aa)
TCM_0407713'-5'-exoribonuclease family protein, putative isoform 1. (420 aa)
TCM_040892Rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing protein isoform 2. (353 aa)
TCM_037720Class II aminoacyl-tRNA and biotin synthetases superfamily protein, ARATH isoform 1. (569 aa)
TCM_041312Uncharacterized protein. (72 aa)
TCM_041099Splicing endonuclease 2, putative. (240 aa)
TCM_041088RNAligase isoform 1. (1134 aa)
TCM_041147Nucleotidylyl transferase superfamily protein isoform 2; Belongs to the class-I aminoacyl-tRNA synthetase family. (402 aa)
TCM_041225annotation not available (255 aa)
TCM_041355Paxneb protein-related. (333 aa)
TCM_041214Uncharacterized protein. (247 aa)
TCM_041492tRNA delta(2)-isopentenylpyrophosphate transferase isoform 1; Belongs to the IPP transferase family. (491 aa)
TCM_041460Aceous RNase P 3 isoform 1. (616 aa)
TCM_038590Uncharacterized protein isoform 1. (150 aa)
TCM_042104Uncharacterized protein. (160 aa)
TCM_041940Polymerase/histidinol phosphatase-like, putative isoform 1. (759 aa)
TCM_042326RNA polymerases N / 8 kDa subunit. (71 aa)
TCM_040409Lipoyltransferase 2 isoform 1. (291 aa)
TCM_040796THUMP domain-containing protein 1 isoform 1. (430 aa)
TCM_041227annotation not available (569 aa)
TCM_042258Pseudouridine synthase family protein. (507 aa)
Your Current Organism:
Theobroma cacao
NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa
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