STRINGSTRING
TCM_025106 TCM_025106 TCM_020717 TCM_020717 TCM_021691 TCM_021691 TCM_020661 TCM_020661 TCM_011631 TCM_011631 TCM_011662 TCM_011662 TCM_010129 TCM_010129 TCM_007697 TCM_007697 TCM_041547 TCM_041547 TCM_007077 TCM_007077 TCM_005016 TCM_005016 TCM_004925 TCM_004925 TCM_046691 TCM_046691 TCM_002491 TCM_002491 TCM_005222 TCM_005222 TCM_001025 TCM_001025 TCM_002192 TCM_002192 TCM_001329 TCM_001329 TCM_001023 TCM_001023 TCM_042027 TCM_042027 TCM_041685 TCM_041685 TCM_037973 TCM_037973 TCM_037589 TCM_037589 TCM_029338 TCM_029338 TCM_037410 TCM_037410 TCM_036908 TCM_036908 TCM_037008 TCM_037008 TCM_030466 TCM_030466 TCM_026937 TCM_026937 TCM_029345 TCM_029345 TCM_029333 TCM_029333 TCM_029341 TCM_029341 TCM_015191 TCM_015191 TCM_016168 TCM_016168 TCM_015190 TCM_015190 TCM_012003 TCM_012003 TCM_013315 TCM_013315 TCM_012351 TCM_012351 TCM_012853 TCM_012853 TCM_013468 TCM_013468 TCM_036589 TCM_036589 TCM_045152 TCM_045152 TCM_044507 TCM_044507 TCM_043141 TCM_043141 TCM_034795 TCM_034795 TCM_036535 TCM_036535 TCM_031646 TCM_031646 TCM_032899 TCM_032899 TCM_026431 TCM_026431 TCM_025865 TCM_025865
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TCM_025106Dicer-like protein isoform 1; Belongs to the helicase family. Dicer subfamily. (1418 aa)
TCM_020717Stabilizer of iron transporter SufD / Polynucleotidyl transferase isoform 1; Belongs to the argonaute family. (994 aa)
TCM_021691HEAT repeat-containing protein isoform 1. (1338 aa)
TCM_020661P-loop containing nucleoside triphosphate hydrolases superfamily protein. (876 aa)
TCM_011631Argonaute family protein; Belongs to the argonaute family. (1014 aa)
TCM_011662Uncharacterized protein. (163 aa)
TCM_010129DEAD/DEAH box helicase, putative isoform 1. (1167 aa)
TCM_007697P-loop containing nucleoside triphosphate hydrolases superfamily protein, putative. (707 aa)
TCM_041547Argonaute protein group; Belongs to the argonaute family. (988 aa)
TCM_007077Endonuclease or glycosyl hydrolase. (528 aa)
TCM_005016Dicer-like 1 isoform 1; Belongs to the helicase family. Dicer subfamily. (2007 aa)
TCM_004925Endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain, putative isoform 1. (664 aa)
TCM_046691Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (174 aa)
TCM_002491Sm domain-containing protein. (359 aa)
TCM_005222Galactose oxidase/kelch repeat superfamily protein isoform 1. (403 aa)
TCM_001025Argonaute protein group, putative; Belongs to the argonaute family. (970 aa)
TCM_002192Eukaryotic translation initiation factor 2c, putative isoform 2; Belongs to the argonaute family. (904 aa)
TCM_001329Endonuclease or glycosyl hydrolase, putative isoform 1. (1073 aa)
TCM_001023Argonaute protein group, putative; Belongs to the argonaute family. (978 aa)
TCM_042027Argonaute family protein isoform 1. (913 aa)
TCM_041685RNA helicase, ATP-dependent, SK12/DOB1 protein isoform 1. (1441 aa)
TCM_037973Stabilizer of iron transporter SufD / Polynucleotidyl transferase isoform 1; Belongs to the argonaute family. (943 aa)
TCM_037589Transducin/WD40 repeat-like superfamily protein. (321 aa)
TCM_029338Argonaute family protein, putative. (425 aa)
TCM_037410Ribonuclease III, putative isoform 1; Belongs to the helicase family. Dicer subfamily. (1639 aa)
TCM_036908DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1184 aa)
TCM_037008RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs). Belongs to the RdRP family. (1197 aa)
TCM_030466DNA-directed RNA polymerase II subunit rpb4, putative isoform 1. (231 aa)
TCM_026937Double-stranded RNA binding protein-related / DsRBD protein-related, putative isoform 1. (954 aa)
TCM_029345Argonaute protein group, putative isoform 1; Belongs to the argonaute family. (1016 aa)
TCM_029333Argonaute protein group. (794 aa)
TCM_029341Argonaute protein group; Belongs to the argonaute family. (904 aa)
TCM_015191Cleavage and polyadenylation specificity factor subunit 2. (742 aa)
TCM_016168DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1484 aa)
TCM_015190Cleavage and polyadenylation specificity factor subunit 2. (252 aa)
TCM_012003BAH domain,TFIIS helical bundle-like domain isoform 1. (1630 aa)
TCM_013315UPF0614 protein C14orf102, putative isoform 1. (1173 aa)
TCM_012351Hydroxyproline-rich glycoprotein family protein, putative isoform 1. (396 aa)
TCM_012853Uncharacterized protein. (91 aa)
TCM_013468Stabilizer of iron transporter SufD / Polynucleotidyl transferase isoform 1; Belongs to the argonaute family. (1063 aa)
TCM_036589Cleavage stimulation factor 64 kDa subunit, putative. (521 aa)
TCM_045152DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1788 aa)
TCM_044507Tetratricopeptide repeat-like superfamily protein isoform 1. (761 aa)
TCM_043141Decapping 2 isoform 1. (321 aa)
TCM_034795Tetratricopeptide repeat (TPR)-like superfamily protein, putative isoform 1. (1194 aa)
TCM_036535Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform 1. (1168 aa)
TCM_031646Polynucleotidyl transferase, ribonuclease H-like superfamily protein, putative. (332 aa)
TCM_032899Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform 1. (1279 aa)
TCM_026431P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1. (882 aa)
TCM_025865Double-stranded-RNA-binding protein 4, putative. (448 aa)
Your Current Organism:
Theobroma cacao
NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.