STRINGSTRING
TCM_038296 TCM_038296 TCM_033022 TCM_033022 TCM_034356 TCM_034356 TCM_043101 TCM_043101 TCM_012263 TCM_012263 TCM_012179 TCM_012179 TCM_014256 TCM_014256 TCM_016289 TCM_016289 TCM_037278 TCM_037278 TCM_041482 TCM_041482 TCM_017920 TCM_017920 TCM_017324 TCM_017324 TCM_017280 TCM_017280 TCM_010128 TCM_010128 TCM_017328 TCM_017328 TCM_007207 TCM_007207 TCM_007621 TCM_007621 TCM_005304 TCM_005304 TCM_000717 TCM_000717 TCM_001516 TCM_001516
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TCM_038296Enhancer of polycomb-like transcription factor protein, putative isoform 4. (1721 aa)
TCM_033022Peptidyl-prolyl cis-trans isomerase G isoform 4. (818 aa)
TCM_034356LSD1-like 1. (783 aa)
TCM_043101Duplicated homeodomain-like superfamily protein isoform 2. (1384 aa)
TCM_012263Histone deacetylase 15 isoform 1. (580 aa)
TCM_012179Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (470 aa)
TCM_014256Histone deacetylase 5 isoform 1. (659 aa)
TCM_016289ARID/BRIGHT DNA-binding domain,ELM2 domain protein, putative. (616 aa)
TCM_037278Histone deacetylase 2 isoform 1. (379 aa)
TCM_041482Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (456 aa)
TCM_017920SIN3-like 2, putative isoform 2. (1391 aa)
TCM_017324HDAC_interact domain-containing protein. (369 aa)
TCM_017280HDAC_interact domain-containing protein. (369 aa)
TCM_010128WRKY domain class transcription factor. (1446 aa)
TCM_017328HDAC_interact domain-containing protein. (326 aa)
TCM_007207Regulator of Vps4 activity in the MVB pathway protein. (162 aa)
TCM_007621Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (499 aa)
TCM_005304ARID/BRIGHT DNA-binding domain,ELM2 domain protein, putative isoform 3. (676 aa)
TCM_000717WD-40 repeat family protein isoform 1. (599 aa)
TCM_001516Histone deacetylase 14 isoform 1. (509 aa)
Your Current Organism:
Theobroma cacao
NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa
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