44 items (Theobroma cacao) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TCM_022433	Repressor of gene silencing 1 isoform 1. (1922 aa)
	TCM_022528	Uridine-ribohydrolase 1 isoform 1. (344 aa)
	TCM_022858	Cytokinin riboside 5'-monophosphate phosphoribohydrolase; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms. (215 aa)
	TCM_025184	Cytidine/deoxycytidylate deaminase family protein isoform 1. (630 aa)
	TCM_024945	DNA-3-methyladenine glycosylase isoform 1. (309 aa)
	TCM_026507	Inosine-uridine preferring nucleoside hydrolase family protein. (945 aa)
	TCM_034087	Uncharacterized protein. (288 aa)
	TCM_033523	Uncharacterized protein. (374 aa)
	TCM_027275	MUTM-1 isoform 1. (416 aa)
	TCM_027436	DNA glycosylase superfamily protein, putative. (376 aa)
	TCM_029929	Toll-Interleukin-Resistance domain family protein. (203 aa)
	TCM_037057	DNA glycosylase superfamily protein isoform 1. (379 aa)
	TCM_037315	Cytokinin riboside 5'-monophosphate phosphoribohydrolase; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms. (216 aa)
	TCM_040834	Indigoidine synthase A family protein isoform 1. (334 aa)
	TCM_039125	Ribosomal_L7Ae domain-containing protein. (155 aa)
	TCM_042079	Cytokinin riboside 5'-monophosphate phosphoribohydrolase; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms. (250 aa)
	TCM_041509	HhH-GPD base excision DNA repair family protein, putative. (387 aa)
	TCM_033602	DNA glycosylase superfamily protein isoform 2. (413 aa)
	TCM_034050	DNA glycosylase superfamily protein. (397 aa)
	TCM_000337	tRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6, putative. (224 aa)
	TCM_033995	DNA-3-methyladenine glycosylase, putative. (332 aa)
	TCM_031369	Toll-Interleukin-Resistance domain family protein. (208 aa)
	TCM_034207	Cytokinin riboside 5'-monophosphate phosphoribohydrolase; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms. (240 aa)
	TCM_035166	8-oxoguanine DNA glycosylase, putative isoform 1. (363 aa)
	TCM_043681	DNA N-glycosylase/DNA-(Apurinic or apyrimidinic site) lyase, putative isoform 2. (1999 aa)
	TCM_011985	DNA glycosylase superfamily protein isoform 1. (446 aa)
	TCM_015980	Plant VAP. (241 aa)
	TCM_027210	Uncharacterized protein isoform 1. (467 aa)
	TCM_000372	DNA-3-methyladenine glycosylase 1. (326 aa)
	TCM_001867	DNA N-glycosylase/DNA-(Apurinic or apyrimidinic site) lyase, putative. (126 aa)
	TCM_002530	Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. (461 aa)
	TCM_005577	Plant VAP. (241 aa)
	TCM_005872	Cytokinin riboside 5'-monophosphate phosphoribohydrolase; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms. (239 aa)
	TCM_006851	DUF4408 domain-containing protein. (232 aa)
	TCM_006702	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 isoform 1. (297 aa)
	TCM_005970	DNA glycosylase superfamily protein, putative. (398 aa)
	TCM_011427	DNA glycosylase superfamily protein isoform 1. (323 aa)
	TCM_011079	Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (318 aa)
	TCM_020123	Uncharacterized protein. (73 aa)
	NTH1	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. (387 aa)
	TCM_021097	Inosine-uridine preferring nucleoside hydrolase family protein isoform 1. (949 aa)
	TCM_021538	Uridine-ribohydrolase 2. (322 aa)
	TCM_021893	Uncharacterized protein isoform 2. (215 aa)
	TCM_022168	Cytokinin riboside 5'-monophosphate phosphoribohydrolase; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms. (233 aa)

Your Current Organism:

Theobroma cacao

NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NTH1	TCM_002530	A0A061EJZ5	A0A061DMJ8	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.	Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs.	0.598
NTH1	TCM_011079	A0A061EJZ5	A0A061E9U8	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.	Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.	0.560
NTH1	TCM_011985	A0A061EJZ5	A0A061G0N8	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.	DNA glycosylase superfamily protein isoform 1.	0.900
NTH1	TCM_024945	A0A061EJZ5	A0A061EYM7	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.	DNA-3-methyladenine glycosylase isoform 1.	0.566
NTH1	TCM_027275	A0A061EJZ5	A0A061G9S4	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.	MUTM-1 isoform 1.	0.643
NTH1	TCM_039125	A0A061EJZ5	A0A061GXJ6	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.	Ribosomal_L7Ae domain-containing protein.	0.643
TCM_000372	TCM_034050	A0A061DG66	A0A061FD01	DNA-3-methyladenine glycosylase 1.	DNA glycosylase superfamily protein.	0.903
TCM_002530	NTH1	A0A061DMJ8	A0A061EJZ5	Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs.	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.	0.598
TCM_002530	TCM_011079	A0A061DMJ8	A0A061E9U8	Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs.	Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.	0.628
TCM_002530	TCM_020123	A0A061DMJ8	A0A061EJ00	Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs.	Uncharacterized protein.	0.598
TCM_002530	TCM_024945	A0A061DMJ8	A0A061EYM7	Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs.	DNA-3-methyladenine glycosylase isoform 1.	0.481
TCM_002530	TCM_027210	A0A061DMJ8	A0A061G8U0	Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs.	Uncharacterized protein isoform 1.	0.453
TCM_002530	TCM_027275	A0A061DMJ8	A0A061G9S4	Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs.	MUTM-1 isoform 1.	0.603
TCM_002530	TCM_033523	A0A061DMJ8	A0A061FC08	Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs.	Uncharacterized protein.	0.453
TCM_002530	TCM_035166	A0A061DMJ8	A0A061FPA9	Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs.	8-oxoguanine DNA glycosylase, putative isoform 1.	0.556
TCM_002530	TCM_039125	A0A061DMJ8	A0A061GXJ6	Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs.	Ribosomal_L7Ae domain-containing protein.	0.603
TCM_011079	NTH1	A0A061E9U8	A0A061EJZ5	Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.	Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines.	0.560
TCM_011079	TCM_002530	A0A061E9U8	A0A061DMJ8	Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.	Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs.	0.628
TCM_011079	TCM_020123	A0A061E9U8	A0A061EJ00	Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.	Uncharacterized protein.	0.560
TCM_011079	TCM_024945	A0A061E9U8	A0A061EYM7	Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.	DNA-3-methyladenine glycosylase isoform 1.	0.578