25 items (Theobroma cacao) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TCM_001652	Uncharacterized protein isoform 1. (443 aa)
	TCM_041372	F-box and associated interaction domains-containing protein. (109 aa)
	TCM_040506	Cell differentiation, Rcd1-like protein isoform 4. (322 aa)
	TCM_037083	Polynucleotidyl transferase, ribonuclease H-like superfamily protein. (274 aa)
	TCM_038150	Tetratricopeptide repeat-like superfamily protein. (851 aa)
	TCM_027417	CCR4-associated factor 1. (356 aa)
	TCM_027418	Polynucleotidyl transferase, ribonuclease H-like superfamily protein isoform 1. (274 aa)
	TCM_027415	Polynucleotidyl transferase, ribonuclease H-like superfamily protein isoform 1. (274 aa)
	TCM_015661	F-box domain-containing protein. (422 aa)
	TCM_011957	RING/U-box superfamily protein, putative isoform 1. (346 aa)
	TCM_014910	Ccr4-not transcription complex, putative. (2253 aa)
	TCM_043331	Polynucleotidyl transferase, putative. (252 aa)
	TCM_026258	F-box associated ubiquitination effector family protein, putative. (410 aa)
	TCM_024996	DNAse I-like superfamily protein isoform 1. (602 aa)
	TCM_026449	Transcription regulator NOT2/NOT3/NOT5 family protein. (904 aa)
	TCM_022844	Polynucleotidyl transferase. (285 aa)
	TCM_022079	RNA binding family protein, putative isoform 1. (1086 aa)
	TCM_017922	Uncharacterized protein. (269 aa)
	TCM_006895	Polynucleotidyl transferase, putative. (205 aa)
	TCM_005611	Ccr4-not transcription complex, putative isoform 1. (2413 aa)
	TCM_002114	Cell differentiation, Rcd1-like protein, putative. (324 aa)
	TCM_042001	RNA binding family protein, putative isoform 1. (1045 aa)
	TCM_041933	NOT2 / NOT3 / NOT5 family isoform 1. (664 aa)
	TCM_041300	Polynucleotidyl transferase, ribonuclease H-like superfamily protein. (280 aa)
	TCM_041365	Uncharacterized protein. (208 aa)

Your Current Organism:

Theobroma cacao

NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TCM_001652	TCM_002114	A0A061DJL1	A0A061DKH4	Uncharacterized protein isoform 1.	Cell differentiation, Rcd1-like protein, putative.	0.962
TCM_001652	TCM_005611	A0A061DJL1	A0A061DVB3	Uncharacterized protein isoform 1.	Ccr4-not transcription complex, putative isoform 1.	0.991
TCM_001652	TCM_006895	A0A061DJL1	A0A061E6W8	Uncharacterized protein isoform 1.	Polynucleotidyl transferase, putative.	0.810
TCM_001652	TCM_011957	A0A061DJL1	A0A061G0I5	Uncharacterized protein isoform 1.	RING/U-box superfamily protein, putative isoform 1.	0.871
TCM_001652	TCM_014910	A0A061DJL1	A0A061FZ97	Uncharacterized protein isoform 1.	Ccr4-not transcription complex, putative.	0.991
TCM_001652	TCM_015661	A0A061DJL1	A0A061G235	Uncharacterized protein isoform 1.	F-box domain-containing protein.	0.605
TCM_001652	TCM_017922	A0A061DJL1	A0A061EE38	Uncharacterized protein isoform 1.	Uncharacterized protein.	0.821
TCM_001652	TCM_022079	A0A061DJL1	A0A061ERU0	Uncharacterized protein isoform 1.	RNA binding family protein, putative isoform 1.	0.871
TCM_001652	TCM_022844	A0A061DJL1	A0A061F1L7	Uncharacterized protein isoform 1.	Polynucleotidyl transferase.	0.810
TCM_001652	TCM_024996	A0A061DJL1	A0A061F4X8	Uncharacterized protein isoform 1.	DNAse I-like superfamily protein isoform 1.	0.853
TCM_001652	TCM_026258	A0A061DJL1	A0A061F904	Uncharacterized protein isoform 1.	F-box associated ubiquitination effector family protein, putative.	0.605
TCM_001652	TCM_026449	A0A061DJL1	A0A061F2E9	Uncharacterized protein isoform 1.	Transcription regulator NOT2/NOT3/NOT5 family protein.	0.988
TCM_001652	TCM_027415	A0A061DJL1	A0A061G812	Uncharacterized protein isoform 1.	Polynucleotidyl transferase, ribonuclease H-like superfamily protein isoform 1.	0.810
TCM_001652	TCM_027417	A0A061DJL1	A0A061GG58	Uncharacterized protein isoform 1.	CCR4-associated factor 1.	0.810
TCM_001652	TCM_027418	A0A061DJL1	A0A061G8Z2	Uncharacterized protein isoform 1.	Polynucleotidyl transferase, ribonuclease H-like superfamily protein isoform 1.	0.810
TCM_001652	TCM_037083	A0A061DJL1	A0A061GR30	Uncharacterized protein isoform 1.	Polynucleotidyl transferase, ribonuclease H-like superfamily protein.	0.810
TCM_001652	TCM_038150	A0A061DJL1	A0A061GMW2	Uncharacterized protein isoform 1.	Tetratricopeptide repeat-like superfamily protein.	0.998
TCM_001652	TCM_040506	A0A061DJL1	A0A061GSP3	Uncharacterized protein isoform 1.	Cell differentiation, Rcd1-like protein isoform 4.	0.962
TCM_001652	TCM_041300	A0A061DJL1	A0A061GVA7	Uncharacterized protein isoform 1.	Polynucleotidyl transferase, ribonuclease H-like superfamily protein.	0.810
TCM_001652	TCM_041365	A0A061DJL1	A0A061GV66	Uncharacterized protein isoform 1.	Uncharacterized protein.	0.605